RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
SFXN3-205ENST00000470252 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
SFXN3-205ENST00000470252 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 HYPKQ9NX55 129 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 NLRP6P59044 892 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
SFXN3-205ENST00000470252 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-205ENST00000470252 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 PTPRUQ92729 1446 aa15.76■□□□□ 0.11
SFXN3-205ENST00000470252 HOXC9P31274 260 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
SFXN3-205ENST00000470252 PDRG1Q9NUG6 133 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 LTKP29376 864 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 NUTM2GQ5VZR2 741 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 TSC1Q92574 1164 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 MTMR6Q9Y217 621 aa15.75■□□□□ 0.11
SFXN3-205ENST00000470252 GLRX3O76003 335 aaKnown RBP15.74■□□□□ 0.11
SFXN3-205ENST00000470252 PTH1RQ03431 593 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 ADCK5Q3MIX3 580 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
SFXN3-205ENST00000470252 RUFY2Q8WXA3 655 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 PLEKHG1Q9ULL1 1385 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
SFXN3-205ENST00000470252 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 TTC41PQ6P2S7 1318 aa15.74■□□□□ 0.11
SFXN3-205ENST00000470252 VPS53Q5VIR6 699 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
SFXN3-205ENST00000470252 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 BEND3Q5T5X7 828 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
SFXN3-205ENST00000470252 CHPF2Q9P2E5 772 aa15.73■□□□□ 0.11
SFXN3-205ENST00000470252 AP5Z1O43299 807 aa15.72■□□□□ 0.11
SFXN3-205ENST00000470252 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
SFXN3-205ENST00000470252 CCDC94Q9BW85 323 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-205ENST00000470252 SH2B1Q9NRF2 756 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-205ENST00000470252 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
SFXN3-205ENST00000470252 AMOTL2Q9Y2J4 779 aa15.72■□□□□ 0.11
SFXN3-205ENST00000470252 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
SFXN3-205ENST00000470252 GTF2F1P35269 517 aaKnown RBP eCLIP15.71■□□□□ 0.11
SFXN3-205ENST00000470252 CLASRPQ8N2M8 674 aaKnown RBP15.71■□□□□ 0.11
SFXN3-205ENST00000470252 ZSWIM6Q9HCJ5 1215 aa15.71■□□□□ 0.11
SFXN3-205ENST00000470252 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
SFXN3-205ENST00000470252 CHD2O14647 1828 aaKnown RBP15.71■□□□□ 0.11
SFXN3-205ENST00000470252 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
SFXN3-205ENST00000470252 ZNF710Q8N1W2 664 aa15.71■□□□□ 0.11
SFXN3-205ENST00000470252 NECAB1Q8N987 351 aa15.71■□□□□ 0.11
SFXN3-205ENST00000470252 SPC24Q8NBT2 197 aa15.71■□□□□ 0.11
SFXN3-205ENST00000470252 ANXA1P04083 346 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 CCDC192P0DO97 292 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 ME3Q16798 604 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
SFXN3-205ENST00000470252 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 TM6SF1Q9BZW5 370 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 KCNF1Q9H3M0 494 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 KIF3AQ9Y496 699 aa15.7■□□□□ 0.1
SFXN3-205ENST00000470252 GPATCH3Q96I76 525 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 PYCARDQ9ULZ3 195 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 IFIT2P09913 472 aaKnown RBP15.69■□□□□ 0.1
SFXN3-205ENST00000470252 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
SFXN3-205ENST00000470252 KIAA1524Q8TCG1 905 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 PRDM4Q9UKN5 801 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
SFXN3-205ENST00000470252 TPM3P06753 285 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 KCNJ4P48050 445 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
SFXN3-205ENST00000470252 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 GOLGA6L6A8MZA4 724 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 NECTIN1Q15223 517 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 KCNB2Q92953 911 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 LGR6Q9HBX8 967 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
SFXN3-205ENST00000470252 ADCY9O60503 1353 aa15.68■□□□□ 0.1
SFXN3-205ENST00000470252 KCNQ3O43525 872 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 KRT85P78386 507 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 TTC6Q86TZ1 520 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 EVI5LQ96CN4 794 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 TPCN1Q9ULQ1 816 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
SFXN3-205ENST00000470252 LTN1O94822 1766 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 CAMK4Q16566 473 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 CREB3L3Q68CJ9 461 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
SFXN3-205ENST00000470252 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
SFXN3-205ENST00000470252 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
SFXN3-205ENST00000470252 AACSQ86V21 672 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms