RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 HEG1Q9ULI3 1381 aa11.39□□□□□ -0.59
UBA3-208ENST00000465627 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
UBA3-208ENST00000465627 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
UBA3-208ENST00000465627 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
UBA3-208ENST00000465627 RGS19P49795 217 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 KRT24Q2M2I5 525 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 ALDH1L2Q3SY69 923 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 MIS18AQ9NYP9 233 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
UBA3-208ENST00000465627 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 UBR2Q8IWV8 1755 aa11.38□□□□□ -0.59
UBA3-208ENST00000465627 FOXN1O15353 648 aa11.37□□□□□ -0.59
UBA3-208ENST00000465627 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
UBA3-208ENST00000465627 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
UBA3-208ENST00000465627 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
UBA3-208ENST00000465627 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
UBA3-208ENST00000465627 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 PLIN1O60240 522 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 POLD1P28340 1107 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
UBA3-208ENST00000465627 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
UBA3-208ENST00000465627 C20orf194Q5TEA3 1177 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
UBA3-208ENST00000465627 SOS1Q07889 1333 aaPredicted RBP11.36□□□□□ -0.59
UBA3-208ENST00000465627 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
UBA3-208ENST00000465627 ITGB4P16144 1822 aa11.35□□□□□ -0.59
UBA3-208ENST00000465627 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
UBA3-208ENST00000465627 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
UBA3-208ENST00000465627 GSE1Q14687 1217 aa11.35□□□□□ -0.59
UBA3-208ENST00000465627 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
UBA3-208ENST00000465627 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
UBA3-208ENST00000465627 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
UBA3-208ENST00000465627 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
UBA3-208ENST00000465627 KCNQ3O43525 872 aa11.34□□□□□ -0.59
UBA3-208ENST00000465627 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
UBA3-208ENST00000465627 C5P01031 1676 aa11.34□□□□□ -0.59
UBA3-208ENST00000465627 ERVV-2B6SEH9 535 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 NEFLP07196 543 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 TEFQ10587 303 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 KCPQ6ZWJ8 1503 aa11.33□□□□□ -0.6
UBA3-208ENST00000465627 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 HOXB7P09629 217 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 TNNQ9UQP3 1299 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
UBA3-208ENST00000465627 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
UBA3-208ENST00000465627 RLBP1P12271 317 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 FSTL1Q12841 308 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
UBA3-208ENST00000465627 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
UBA3-208ENST00000465627 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
UBA3-208ENST00000465627 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
UBA3-208ENST00000465627 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
UBA3-208ENST00000465627 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
UBA3-208ENST00000465627 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
UBA3-208ENST00000465627 EXOC5O00471 708 aa11.29□□□□□ -0.6
UBA3-208ENST00000465627 TRIM27P14373 513 aa11.29□□□□□ -0.6
UBA3-208ENST00000465627 MARCH10Q8NA82 808 aaPredicted RBP11.29□□□□□ -0.6
UBA3-208ENST00000465627 EXOC6Q8TAG9 804 aa11.29□□□□□ -0.6
UBA3-208ENST00000465627 DDX54Q8TDD1 881 aaKnown RBP11.29□□□□□ -0.6
UBA3-208ENST00000465627 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
UBA3-208ENST00000465627 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
UBA3-208ENST00000465627 BCL9O00512 1426 aa11.29□□□□□ -0.6
UBA3-208ENST00000465627 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 CICQ96RK0 1608 aaPredicted RBP11.28□□□□□ -0.6
UBA3-208ENST00000465627 ABCC4O15439 1325 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 CABP4P57796 275 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 DDB1Q16531 1140 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
UBA3-208ENST00000465627 PANK1Q8TE04 598 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
UBA3-208ENST00000465627 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
UBA3-208ENST00000465627 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
UBA3-208ENST00000465627 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
UBA3-208ENST00000465627 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
UBA3-208ENST00000465627 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
UBA3-208ENST00000465627 G2E3Q7L622 706 aa11.26□□□□□ -0.61
UBA3-208ENST00000465627 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
UBA3-208ENST00000465627 PIGBQ92521 554 aa11.26□□□□□ -0.61
UBA3-208ENST00000465627 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
UBA3-208ENST00000465627 PTPRCP08575 1304 aa11.25□□□□□ -0.61
UBA3-208ENST00000465627 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
UBA3-208ENST00000465627 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
UBA3-208ENST00000465627 PDIA6Q15084 440 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms