RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 ATP4AP20648 1035 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
XRN1-205ENST00000465507 FOXR1Q6PIV2 292 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 ALDH16A1Q8IZ83 802 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 IGF1RP08069 1367 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
XRN1-205ENST00000465507 IGFBP4P22692 258 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 ATP2B4P23634 1241 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 FKBP5Q13451 457 aaPredicted RBP6.66□□□□□ -1.34
XRN1-205ENST00000465507 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
XRN1-205ENST00000465507 WDR44Q5JSH3 913 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 CAPN12Q6ZSI9 719 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 ABHD17AQ96GS6 310 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 TRERF1Q96PN7 1200 aa6.66□□□□□ -1.34
XRN1-205ENST00000465507 ZIC5Q96T25 663 aa6.65□□□□□ -1.34
XRN1-205ENST00000465507 C2orf49Q9BVC5 232 aaPredicted RBP6.65□□□□□ -1.34
XRN1-205ENST00000465507 KLK14Q9P0G3 267 aa6.65□□□□□ -1.34
XRN1-205ENST00000465507 DNMT3AQ9Y6K1 912 aaPredicted RBP6.65□□□□□ -1.34
XRN1-205ENST00000465507 THBS1P07996 1170 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 FAM69CQ0P6D2 419 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 DGKZQ13574 1117 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 SWI5Q1ZZU3 235 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 GPAT2Q6NUI2 795 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 ZNF295-AS1Q8N0V1 137 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
XRN1-205ENST00000465507 ZDHHC3Q9NYG2 299 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 SLAIN2Q9P270 581 aa6.64□□□□□ -1.35
XRN1-205ENST00000465507 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
XRN1-205ENST00000465507 WEE1P30291 646 aa6.63□□□□□ -1.35
XRN1-205ENST00000465507 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
XRN1-205ENST00000465507 ZNF280CQ8ND82 737 aa6.63□□□□□ -1.35
XRN1-205ENST00000465507 ACDQ96AP0 544 aa6.63□□□□□ -1.35
XRN1-205ENST00000465507 ZCCHC2Q9C0B9 1178 aaKnown RBP6.63□□□□□ -1.35
XRN1-205ENST00000465507 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
XRN1-205ENST00000465507 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
XRN1-205ENST00000465507 FOXO3O43524 673 aa6.62□□□□□ -1.35
XRN1-205ENST00000465507 CD33P20138 364 aa6.62□□□□□ -1.35
XRN1-205ENST00000465507 C1orf216Q8TAB5 229 aa6.62□□□□□ -1.35
XRN1-205ENST00000465507 CEP63Q96MT8 703 aa6.62□□□□□ -1.35
XRN1-205ENST00000465507 CNTNAP5Q8WYK1 1306 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 BNIP3LO60238 219 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 BCRP11274 1271 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 MX2P20592 715 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 OCLNQ16625 522 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 CLP1Q92989 425 aaKnown RBP6.61□□□□□ -1.35
XRN1-205ENST00000465507 SUSD3Q96L08 255 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 SAP130Q9H0E3 1048 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 CRISPLD1Q9H336 500 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 QTRT2Q9H974 415 aaKnown RBP6.61□□□□□ -1.35
XRN1-205ENST00000465507 ANO2Q9NQ90 1003 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 ENAMQ9NRM1 1142 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 SEPT3Q9UH03 358 aa6.61□□□□□ -1.35
XRN1-205ENST00000465507 ABL1P00519 1130 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 FGFR3P22607 806 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 FIGNL1Q6PIW4 674 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 RAB44Q7Z6P3 723 aaPredicted RBP6.6□□□□□ -1.35
XRN1-205ENST00000465507 NEDD1Q8NHV4 660 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 USP20Q9Y2K6 914 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
XRN1-205ENST00000465507 BMP4P12644 408 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 CTBSQ01459 385 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 TBC1D8BQ0IIM8 1120 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 GRIN2CQ14957 1233 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 RTN1Q16799 776 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.59□□□□□ -1.35
XRN1-205ENST00000465507 LRFN2Q9ULH4 789 aa6.59□□□□□ -1.35
XRN1-205ENST00000465507 MAPTP10636 758 aaKnown RBP6.58□□□□□ -1.36
XRN1-205ENST00000465507 SFSWAPQ12872 951 aaKnown RBP6.58□□□□□ -1.36
XRN1-205ENST00000465507 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 COX20Q5RI15 118 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 C1orf53Q5VUE5 145 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 NLRP8Q86W28 1048 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 BRD7Q9NPI1 651 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
XRN1-205ENST00000465507 PHF20L1A8MW92 1017 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 UBAP2LQ14157 1087 aaKnown RBP6.57□□□□□ -1.36
XRN1-205ENST00000465507 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
XRN1-205ENST00000465507 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 STAG2Q8N3U4 1231 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 DCAF5Q96JK2 942 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 OXCT2Q9BYC2 517 aaPredicted RBP6.57□□□□□ -1.36
XRN1-205ENST00000465507 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 ANKIB1Q9P2G1 1089 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 ATXN7L1Q9ULK2 861 aaPredicted RBP6.57□□□□□ -1.36
XRN1-205ENST00000465507 PRR12Q9ULL5 1215 aa6.57□□□□□ -1.36
XRN1-205ENST00000465507 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
XRN1-205ENST00000465507 OIP5O43482 229 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 IGHA1P01876 353 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 IDH3AP50213 366 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
XRN1-205ENST00000465507 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
XRN1-205ENST00000465507 AAMPQ13685 434 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 C11orf91Q3C1V1 193 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 BTLAQ7Z6A9 289 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 IFT43Q96FT9 208 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms