RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
XRN1-205ENST00000465507 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
XRN1-205ENST00000465507 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
XRN1-205ENST00000465507 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
XRN1-205ENST00000465507 FOXD1Q16676 465 aa16.21■□□□□ 0.19
XRN1-205ENST00000465507 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
XRN1-205ENST00000465507 POTEDQ86YR6 584 aa15.29■□□□□ 0.04
XRN1-205ENST00000465507 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
XRN1-205ENST00000465507 ADRA2BP18089 450 aa15.17■□□□□ 0.02
XRN1-205ENST00000465507 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
XRN1-205ENST00000465507 MSH5O43196 834 aa15.1■□□□□ 0.01
XRN1-205ENST00000465507 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
XRN1-205ENST00000465507 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
XRN1-205ENST00000465507 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
XRN1-205ENST00000465507 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
XRN1-205ENST00000465507 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
XRN1-205ENST00000465507 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
XRN1-205ENST00000465507 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
XRN1-205ENST00000465507 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
XRN1-205ENST00000465507 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
XRN1-205ENST00000465507 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
XRN1-205ENST00000465507 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
XRN1-205ENST00000465507 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
XRN1-205ENST00000465507 KCNA4P22459 653 aa12.88□□□□□ -0.35
XRN1-205ENST00000465507 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
XRN1-205ENST00000465507 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
XRN1-205ENST00000465507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
XRN1-205ENST00000465507 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
XRN1-205ENST00000465507 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
XRN1-205ENST00000465507 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
XRN1-205ENST00000465507 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
XRN1-205ENST00000465507 CAPN15O75808 1086 aa12.21□□□□□ -0.45
XRN1-205ENST00000465507 DSG3P32926 999 aa12.12□□□□□ -0.47
XRN1-205ENST00000465507 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
XRN1-205ENST00000465507 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
XRN1-205ENST00000465507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
XRN1-205ENST00000465507 APLP2Q06481 763 aa12.03□□□□□ -0.48
XRN1-205ENST00000465507 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
XRN1-205ENST00000465507 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
XRN1-205ENST00000465507 ABCB7O75027 752 aa11.98□□□□□ -0.49
XRN1-205ENST00000465507 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
XRN1-205ENST00000465507 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
XRN1-205ENST00000465507 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
XRN1-205ENST00000465507 ZBTB22O15209 634 aa11.81□□□□□ -0.52
XRN1-205ENST00000465507 POTEHQ6S545 545 aa11.8□□□□□ -0.52
XRN1-205ENST00000465507 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
XRN1-205ENST00000465507 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
XRN1-205ENST00000465507 POLA2Q14181 598 aa11.71□□□□□ -0.53
XRN1-205ENST00000465507 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
XRN1-205ENST00000465507 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
XRN1-205ENST00000465507 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
XRN1-205ENST00000465507 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
XRN1-205ENST00000465507 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
XRN1-205ENST00000465507 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
XRN1-205ENST00000465507 FBLN2P98095 1184 aa11.2□□□□□ -0.62
XRN1-205ENST00000465507 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
XRN1-205ENST00000465507 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
XRN1-205ENST00000465507 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
XRN1-205ENST00000465507 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
XRN1-205ENST00000465507 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
XRN1-205ENST00000465507 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
XRN1-205ENST00000465507 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
XRN1-205ENST00000465507 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
XRN1-205ENST00000465507 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
XRN1-205ENST00000465507 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
XRN1-205ENST00000465507 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
XRN1-205ENST00000465507 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
XRN1-205ENST00000465507 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
XRN1-205ENST00000465507 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
XRN1-205ENST00000465507 HAX1O00165 279 aa10.81□□□□□ -0.68
XRN1-205ENST00000465507 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
XRN1-205ENST00000465507 FKBP8Q14318 412 aa10.73□□□□□ -0.69
XRN1-205ENST00000465507 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
XRN1-205ENST00000465507 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
XRN1-205ENST00000465507 EVX2Q03828 476 aa10.71□□□□□ -0.69
XRN1-205ENST00000465507 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
XRN1-205ENST00000465507 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
XRN1-205ENST00000465507 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
XRN1-205ENST00000465507 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
XRN1-205ENST00000465507 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
XRN1-205ENST00000465507 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
XRN1-205ENST00000465507 GABBR2O75899 941 aa10.45□□□□□ -0.74
XRN1-205ENST00000465507 PROM2Q8N271 834 aa10.4□□□□□ -0.74
XRN1-205ENST00000465507 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
XRN1-205ENST00000465507 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
XRN1-205ENST00000465507 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
XRN1-205ENST00000465507 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
XRN1-205ENST00000465507 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
XRN1-205ENST00000465507 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
XRN1-205ENST00000465507 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
XRN1-205ENST00000465507 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
XRN1-205ENST00000465507 CLCN6P51797 869 aa10.21□□□□□ -0.77
XRN1-205ENST00000465507 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
XRN1-205ENST00000465507 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
XRN1-205ENST00000465507 MIER1Q8N108 512 aa10.15□□□□□ -0.78
XRN1-205ENST00000465507 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
XRN1-205ENST00000465507 LHX8Q68G74 356 aa10.14□□□□□ -0.79
XRN1-205ENST00000465507 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
XRN1-205ENST00000465507 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
XRN1-205ENST00000465507 PLSCR2Q9NRY7 297 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms