RNA–Protein interactions for RNA: ENST00000464575.1

CCNL1-205, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-205ENST00000464575 USP17L22D6RA61 530 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 USP17L17D6RBQ6 530 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 USP17L19D6RCP7 530 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 USP17L20D6RJB6 530 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 CLDN10P78369 228 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 KCNA1Q09470 495 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 USP17L24Q0WX57 530 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 MAP7D1Q3KQU3 841 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 ILDR2Q71H61 639 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 TRIM11Q96F44 468 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 PLVAPQ9BX97 442 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
CCNL1-205ENST00000464575 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
CCNL1-205ENST00000464575 ARAFP10398 606 aa6.64□□□□□ -1.35
CCNL1-205ENST00000464575 CHSY3Q70JA7 882 aa6.64□□□□□ -1.35
CCNL1-205ENST00000464575 SEPT12Q8IYM1 358 aa6.64□□□□□ -1.35
CCNL1-205ENST00000464575 FBXO41Q8TF61 875 aa6.64□□□□□ -1.35
CCNL1-205ENST00000464575 CDCA7Q9BWT1 371 aaPredicted RBP6.64□□□□□ -1.35
CCNL1-205ENST00000464575 NEURL1BA8MQ27 555 aa6.63□□□□□ -1.35
CCNL1-205ENST00000464575 CLN3Q13286 438 aa6.63□□□□□ -1.35
CCNL1-205ENST00000464575 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
CCNL1-205ENST00000464575 BAZ1AQ9NRL2 1556 aaPredicted RBP6.63□□□□□ -1.35
CCNL1-205ENST00000464575 KIAA1024Q9UPX6 916 aa6.63□□□□□ -1.35
CCNL1-205ENST00000464575 YBX3P16989 372 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCNL1-205ENST00000464575 RASA1P20936 1047 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 FGFR3P22607 806 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 MCTP1Q6DN14 999 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 ANKMY2Q8IV38 441 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 OGFOD1Q8N543 542 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 ABHD17AQ96GS6 310 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 NDFIP2Q9NV92 336 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
CCNL1-205ENST00000464575 BNIP3LO60238 219 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 SSFA2P28290 1259 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 TXKP42681 527 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 EML3Q32P44 896 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 TXNDC2Q86VQ3 553 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 DOLKQ9UPQ8 538 aa6.61□□□□□ -1.35
CCNL1-205ENST00000464575 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
CCNL1-205ENST00000464575 CCDC9Q9Y3X0 531 aaKnown RBP6.61□□□□□ -1.35
CCNL1-205ENST00000464575 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
CCNL1-205ENST00000464575 DPYDQ12882 1025 aa6.6□□□□□ -1.35
CCNL1-205ENST00000464575 LARP1Q6PKG0 1096 aaKnown RBP6.6□□□□□ -1.35
CCNL1-205ENST00000464575 SIX5Q8N196 739 aa6.6□□□□□ -1.35
CCNL1-205ENST00000464575 CLP1Q92989 425 aaKnown RBP6.6□□□□□ -1.35
CCNL1-205ENST00000464575 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
CCNL1-205ENST00000464575 DNAAF2Q9NVR5 837 aaKnown RBP6.6□□□□□ -1.35
CCNL1-205ENST00000464575 APBA3O96018 575 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 FAM200AQ8TCP9 573 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 RUBCNLQ9H714 662 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 NOD1Q9Y239 953 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
CCNL1-205ENST00000464575 THOC2Q8NI27 1593 aaKnown RBP6.59□□□□□ -1.35
CCNL1-205ENST00000464575 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
CCNL1-205ENST00000464575 PATL2C9JE40 543 aaKnown RBP6.58□□□□□ -1.36
CCNL1-205ENST00000464575 PAX4O43316 350 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 PHKA2P46019 1235 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 ERVK-9P63128 1117 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 OXLD1Q5BKU9 147 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 RNF20Q5VTR2 975 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 TRIM50Q86XT4 487 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 PGBD3Q8N328 593 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 ZNF594Q96JF6 807 aaPredicted RBP6.58□□□□□ -1.36
CCNL1-205ENST00000464575 KLF15Q9UIH9 416 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 ARHGEF11O15085 1522 aa6.58□□□□□ -1.36
CCNL1-205ENST00000464575 DISP3Q9P2K9 1392 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 GTF2IP78347 998 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 EFHC2Q5JST6 749 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 TMCO4Q5TGY1 634 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 CC2D2BQ6DHV5 1058 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 PCDHB11Q9Y5F2 797 aa6.57□□□□□ -1.36
CCNL1-205ENST00000464575 COL17A1Q9UMD9 1497 aaPredicted RBP6.56□□□□□ -1.36
CCNL1-205ENST00000464575 H2AFB1P0C5Y9 115 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 SCNN1AP37088 669 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 SCTRP47872 440 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 ATP1A2P50993 1020 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
CCNL1-205ENST00000464575 OCLNQ16625 522 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 PRRT3Q5FWE3 981 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 CYP2U1Q7Z449 544 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 FMNL2Q96PY5 1086 aa6.56□□□□□ -1.36
CCNL1-205ENST00000464575 NESP48681 1621 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 SPDYE3A6NKU9 549 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 SFI1A8K8P3 1242 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 ADH6P28332 368 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 MSX1P28360 303 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 CENPCQ03188 943 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 SWI5Q1ZZU3 235 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 FCHSD1Q86WN1 690 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 ARHGEF10LQ9HCE6 1279 aa6.55□□□□□ -1.36
CCNL1-205ENST00000464575 SMARCA2P51531 1590 aa6.54□□□□□ -1.36
CCNL1-205ENST00000464575 USP4Q13107 963 aa6.54□□□□□ -1.36
CCNL1-205ENST00000464575 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms