RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 ZNF394Q53GI3 561 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 PLEKHG4Q58EX7 1191 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
EIF3A-202ENST00000462527 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
EIF3A-202ENST00000462527 CRELD1Q96HD1 420 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 TYW1Q9NV66 732 aaKnown RBP10.74□□□□□ -0.69
EIF3A-202ENST00000462527 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
EIF3A-202ENST00000462527 PRC1O43663 620 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 COL9A1P20849 921 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 GNA15P30679 374 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 RACK1P63244 317 aaKnown RBP10.73□□□□□ -0.69
EIF3A-202ENST00000462527 OXLD1Q5BKU9 147 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 PCDHGB7Q9Y5F8 929 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
EIF3A-202ENST00000462527 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 LGR5O75473 907 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 ATF4P18848 351 aaPredicted RBP10.72□□□□□ -0.69
EIF3A-202ENST00000462527 MPSTP25325 297 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 HS2ST1Q7LGA3 356 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
EIF3A-202ENST00000462527 ZBTB24O43167 697 aaPredicted RBP10.71□□□□□ -0.69
EIF3A-202ENST00000462527 SH3BP5O60239 455 aa10.71□□□□□ -0.69
EIF3A-202ENST00000462527 TBX4P57082 545 aa10.71□□□□□ -0.69
EIF3A-202ENST00000462527 Q3C1V9 767 aa10.71□□□□□ -0.69
EIF3A-202ENST00000462527 ALKBH8Q96BT7 664 aaKnown RBP10.71□□□□□ -0.69
EIF3A-202ENST00000462527 ARHGAP35Q9NRY4 1499 aa10.71□□□□□ -0.69
EIF3A-202ENST00000462527 ZCCHC11Q5TAX3 1644 aaKnown RBP10.7□□□□□ -0.7
EIF3A-202ENST00000462527 TNIKQ9UKE5 1360 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 M0R2N6 131 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 PDGFRBP09619 1106 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 HDGFP51858 240 aaKnown RBP10.7□□□□□ -0.7
EIF3A-202ENST00000462527 TSGA10IPQ3SY00 556 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 TSHZ1Q6ZSZ6 1077 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 ARMC2Q8NEN0 867 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
EIF3A-202ENST00000462527 RNPC3Q96LT9 517 aaKnown RBP10.7□□□□□ -0.7
EIF3A-202ENST00000462527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■■■□ 25.1
EIF3A-202ENST00000462527 SIRPGQ9P1W8 387 aa10.7□□□□□ -0.7
EIF3A-202ENST00000462527 RAPGEF6Q8TEU7 1601 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 ABCA8O94911 1581 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 PLB1Q6P1J6 1458 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 GJA8P48165 433 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 RHBDL3P58872 404 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 CHMP4BP1P59074 171 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 PTPN12Q05209 780 aaKnown RBP10.69□□□□□ -0.7
EIF3A-202ENST00000462527 SERINC3Q13530 473 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 STAG1Q8WVM7 1258 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 KCNH8Q96L42 1107 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 SRPK1Q96SB4 655 aaKnown RBP10.69□□□□□ -0.7
EIF3A-202ENST00000462527 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 SRA1Q9HD15 236 aaKnown RBP10.69□□□□□ -0.7
EIF3A-202ENST00000462527 PRR12Q9ULL5 1215 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 AK5Q9Y6K8 562 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 KIF13AQ9H1H9 1805 aa10.69□□□□□ -0.7
EIF3A-202ENST00000462527 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
EIF3A-202ENST00000462527 PTPRGP23470 1445 aa10.68□□□□□ -0.7
EIF3A-202ENST00000462527 SMAPO00193 183 aa10.68□□□□□ -0.7
EIF3A-202ENST00000462527 FOXO3O43524 673 aa10.68□□□□□ -0.7
EIF3A-202ENST00000462527 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
EIF3A-202ENST00000462527 FAM129BQ96TA1 746 aa10.68□□□□□ -0.7
EIF3A-202ENST00000462527 PNMA6FA0A0J9YX94 578 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 HRO43593 1189 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 RPS6KC1Q96S38 1066 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 PLCD4Q9BRC7 762 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 GGT7Q9UJ14 662 aa10.67□□□□□ -0.7
EIF3A-202ENST00000462527 PCF11O94913 1555 aaKnown RBP10.66□□□□□ -0.7
EIF3A-202ENST00000462527 TK2O00142 265 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
EIF3A-202ENST00000462527 SSBP05455 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
EIF3A-202ENST00000462527 IGFBP4P22692 258 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 AMPD3Q01432 767 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
EIF3A-202ENST00000462527 FBF1Q8TES7 1133 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 GPRASP2Q96D09 838 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 NEUROD4Q9HD90 331 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 VPS9D1Q9Y2B5 631 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
EIF3A-202ENST00000462527 PCDHGA11Q9Y5H2 935 aa10.66□□□□□ -0.7
EIF3A-202ENST00000462527 A0A0U1RQG5 324 aaPredicted RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 PPFIA4O75335 1185 aa10.65□□□□□ -0.7
EIF3A-202ENST00000462527 CDC45O75419 566 aa10.65□□□□□ -0.7
EIF3A-202ENST00000462527 EIF1AXP47813 144 aaKnown RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 OS9Q13438 667 aaPredicted RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 ARSHQ5FYA8 562 aa10.65□□□□□ -0.7
EIF3A-202ENST00000462527 ODR4Q5SWX8 454 aa10.65□□□□□ -0.7
EIF3A-202ENST00000462527 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
EIF3A-202ENST00000462527 NIF3L1Q9GZT8 377 aa10.65□□□□□ -0.7
EIF3A-202ENST00000462527 TCEAL9Q9UHQ7 104 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms