RNA–Protein interactions for RNA: ENST00000462166.1

TPRKB-204, Transcript of TP53RK binding protein, human

TSL 3

Gene TPRKB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-204	ENST00000462166	CCDC87	Q9NVE4	849 aa		13.73	□□□□□ -0.21
TPRKB-204	ENST00000462166	LAS1L	Q9Y4W2	734 aa	Known RBP	13.73	□□□□□ -0.21
TPRKB-204	ENST00000462166	COL24A1	Q17RW2	1714 aa		13.73	□□□□□ -0.21
TPRKB-204	ENST00000462166	RPS6KA4	O75676	772 aa		13.72	□□□□□ -0.21
TPRKB-204	ENST00000462166	SLC16A10	Q8TF71	515 aa		13.72	□□□□□ -0.21
TPRKB-204	ENST00000462166	TSPYL4	Q9UJ04	414 aa		13.72	□□□□□ -0.21
TPRKB-204	ENST00000462166	ZBTB1	Q9Y2K1	713 aa		13.72	□□□□□ -0.21
TPRKB-204	ENST00000462166	LAMB4	A4D0S4	1761 aa		13.71	□□□□□ -0.21
TPRKB-204	ENST00000462166	CANX	P27824	592 aa	Known RBP	13.71	□□□□□ -0.21
TPRKB-204	ENST00000462166	PIP4K2A	P48426	406 aa	Predicted RBP	13.71	□□□□□ -0.21
TPRKB-204	ENST00000462166	TRAPPC3L	Q5T215	181 aa		13.71	□□□□□ -0.21
TPRKB-204	ENST00000462166	ARHGEF1	Q92888	912 aa	Known RBP	13.71	□□□□□ -0.21
TPRKB-204	ENST00000462166	STARD3NL	O95772	234 aa		13.7	□□□□□ -0.22
TPRKB-204	ENST00000462166	DIEXF	Q68CQ4	756 aa	Known RBP	13.7	□□□□□ -0.22
TPRKB-204	ENST00000462166	SRP68	Q9UHB9	627 aa	Known RBP	13.7	□□□□□ -0.22
TPRKB-204	ENST00000462166	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.7	□□□□□ -0.22
TPRKB-204	ENST00000462166	USP16	Q9Y5T5	823 aa		13.7	□□□□□ -0.22
TPRKB-204	ENST00000462166	SOS1	Q07889	1333 aa	Predicted RBP	13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	A1BG	P04217	495 aa		13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	SNRPA1	P09661	255 aa	Known RBP	13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	RFC4	P35249	363 aa		13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	MS4A3	Q96HJ5	214 aa		13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	SALL2	Q9Y467	1007 aa	Predicted RBP	13.69	□□□□□ -0.22
TPRKB-204	ENST00000462166	POLD1	P28340	1107 aa		13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	CLCN6	P51797	869 aa		13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	EIF4A1	P60842	406 aa	Known RBP	13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	ARX	Q96QS3	562 aa		13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	COL15A1	P39059	1388 aa		13.68	□□□□□ -0.22
TPRKB-204	ENST00000462166	GOLGA2	Q08379	1002 aa		13.67	□□□□□ -0.22
TPRKB-204	ENST00000462166	GIGYF1	O75420	1035 aa	Predicted RBP	13.66	□□□□□ -0.22
TPRKB-204	ENST00000462166	GYS1	P13807	737 aa		13.66	□□□□□ -0.22
TPRKB-204	ENST00000462166	KRT24	Q2M2I5	525 aa		13.66	□□□□□ -0.22
TPRKB-204	ENST00000462166	EFCAB3	Q8N7B9	438 aa		13.66	□□□□□ -0.22
TPRKB-204	ENST00000462166	TMEM106C	Q9BVX2	250 aa		13.66	□□□□□ -0.22
TPRKB-204	ENST00000462166	USP42	Q9H9J4	1324 aa	Known RBP	13.65	□□□□□ -0.22
TPRKB-204	ENST00000462166	CHL1	O00533	1208 aa		13.65	□□□□□ -0.22
TPRKB-204	ENST00000462166	USPL1	Q5W0Q7	1092 aa		13.65	□□□□□ -0.22
TPRKB-204	ENST00000462166	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.65	□□□□□ -0.22
TPRKB-204	ENST00000462166	ZPR1	O75312	459 aa		13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	MMP10	P09238	476 aa		13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	EIF5	P55010	431 aa	Known RBP	13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	NECTIN2	Q92692	538 aa		13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	MFRP	Q9BY79	579 aa		13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	TBC1D2B	Q9UPU7	963 aa		13.64	□□□□□ -0.23
TPRKB-204	ENST00000462166	SCN7A	Q01118	1682 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	NBPF26	B4DH59	902 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	EIF2S2	P20042	333 aa	Known RBP	13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	NBPF10	Q6P3W6	841 aa	Known RBP	13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	WWC1	Q8IX03	1113 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	NGEF	Q8N5V2	710 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	NBPF15	Q8N660	670 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	MBIP	Q9NS73	344 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	BABAM1	Q9NWV8	329 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	BCOR	Q6W2J9	1755 aa		13.63	□□□□□ -0.23
TPRKB-204	ENST00000462166	CCER2	I3L3R5	266 aa		13.62	□□□□□ -0.23
TPRKB-204	ENST00000462166	IL6ST	P40189	918 aa	Predicted RBP	13.62	□□□□□ -0.23
TPRKB-204	ENST00000462166	NPM2	Q86SE8	214 aa	Known RBP	13.62	□□□□□ -0.23
TPRKB-204	ENST00000462166	IFT57	Q9NWB7	429 aa		13.62	□□□□□ -0.23
TPRKB-204	ENST00000462166	NARF	Q9UHQ1	456 aa		13.62	□□□□□ -0.23
TPRKB-204	ENST00000462166		A0A087WZG4	1122 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	ZNF853	P0CG23	659 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	MYL6B	P14649	208 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	CALD1	Q05682	793 aa	Known RBP	13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	DZIP3	Q86Y13	1208 aa	Known RBP	13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	NLGN1	Q8N2Q7	840 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	SYT17	Q9BSW7	474 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	BCL2L12	Q9HB09	334 aa		13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	AFDN	P55196	1824 aa	Known RBP	13.61	□□□□□ -0.23
TPRKB-204	ENST00000462166	GABBR2	O75899	941 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	ANXA1	P04083	346 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	TIE1	P35590	1138 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	GNAI1	P63096	354 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	CCDC27	Q2M243	656 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	BICDL1	Q6ZP65	573 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	NLGN2	Q8NFZ4	835 aa		13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	TSR2	Q969E8	191 aa	Known RBP	13.6	□□□□□ -0.23
TPRKB-204	ENST00000462166	ELL2	O00472	640 aa	Predicted RBP	13.59	□□□□□ -0.23
TPRKB-204	ENST00000462166	DDR1	Q08345	913 aa		13.59	□□□□□ -0.23
TPRKB-204	ENST00000462166	PARP3	Q9Y6F1	533 aa		13.59	□□□□□ -0.23
TPRKB-204	ENST00000462166	NUP98	P52948	1817 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	CAMTA2	O94983	1202 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	NFIX	Q14938	502 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	PROSER3	Q2NL68	480 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	DUSP27	Q5VZP5	1158 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	TBC1D9B	Q66K14	1250 aa		13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.58	□□□□□ -0.24
TPRKB-204	ENST00000462166	KIF13B	Q9NQT8	1826 aa		13.57	□□□□□ -0.24
TPRKB-204	ENST00000462166	POLRMT	O00411	1230 aa	Known RBP	13.57	□□□□□ -0.24
TPRKB-204	ENST00000462166	MKRN3	Q13064	507 aa	Known RBP	13.57	□□□□□ -0.24
TPRKB-204	ENST00000462166	TTLL7	Q6ZT98	887 aa		13.57	□□□□□ -0.24
TPRKB-204	ENST00000462166	WWC3	Q9ULE0	1092 aa		13.57	□□□□□ -0.24
TPRKB-204	ENST00000462166	TM4SF1	P30408	202 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	PDIA6	Q15084	440 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	HDGFL1	Q5TGJ6	251 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	PELP1	Q8IZL8	1130 aa	Known RBP	13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	TSPYL6	Q8N831	410 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	C8orf58	Q8NAV2	365 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	CHPF2	Q9P2E5	772 aa		13.56	□□□□□ -0.24
TPRKB-204	ENST00000462166	TRPC6	Q9Y210	931 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms