RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 ANKRD31Q8N7Z5 1873 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 GOLGB1Q14789 3259 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 NUP98P52948 1817 aa9.78□□□□□ -0.84
PTPN18-206ENST00000460992 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 RPS6KA4O75676 772 aa9.78□□□□□ -0.84
PTPN18-206ENST00000460992 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 EIF4A1P60842 406 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
PTPN18-206ENST00000460992 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 CHMP4BQ9H444 224 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 SRP68Q9UHB9 627 aaKnown RBP9.78□□□□□ -0.84
PTPN18-206ENST00000460992 C10orf71Q711Q0 1435 aa9.78□□□□□ -0.84
PTPN18-206ENST00000460992 CACNA1SQ13698 1873 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 STARD3NLO95772 234 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 A1BGP04217 495 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 SNRPA1P09661 255 aaKnown RBP9.77□□□□□ -0.85
PTPN18-206ENST00000460992 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 RWDD1Q9H446 243 aaPredicted RBP9.77□□□□□ -0.85
PTPN18-206ENST00000460992 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 PPP1R1BQ9UD71 204 aaPredicted RBP9.77□□□□□ -0.85
PTPN18-206ENST00000460992 USP16Q9Y5T5 823 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 IL16Q14005 1332 aa9.77□□□□□ -0.85
PTPN18-206ENST00000460992 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
PTPN18-206ENST00000460992 HMGB2P26583 209 aaKnown RBP9.76□□□□□ -0.85
PTPN18-206ENST00000460992 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
PTPN18-206ENST00000460992 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
PTPN18-206ENST00000460992 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
PTPN18-206ENST00000460992 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
PTPN18-206ENST00000460992 IFT57Q9NWB7 429 aa9.76□□□□□ -0.85
PTPN18-206ENST00000460992 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 CHL1O00533 1208 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 GYS1P13807 737 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 POLD1P28340 1107 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 RFC4P35249 363 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 EIF5P55010 431 aaKnown RBP9.75□□□□□ -0.85
PTPN18-206ENST00000460992 NBPF10Q6P3W6 841 aaKnown RBP9.75□□□□□ -0.85
PTPN18-206ENST00000460992 NBPF15Q8N660 670 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
PTPN18-206ENST00000460992 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 LAMB2P55268 1798 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
PTPN18-206ENST00000460992 PXDNLA1KZ92 1463 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 ANXA1P04083 346 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 MMP10P09238 476 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 ZNF853P0CG23 659 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 IL6STP40189 918 aaPredicted RBP9.74□□□□□ -0.85
PTPN18-206ENST00000460992 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
PTPN18-206ENST00000460992 CALD1Q05682 793 aaKnown RBP9.74□□□□□ -0.85
PTPN18-206ENST00000460992 GSE1Q14687 1217 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 USPL1Q5W0Q7 1092 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
PTPN18-206ENST00000460992 ARXQ96QS3 562 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 TEX13AQ9BXU3 409 aaPredicted RBP9.74□□□□□ -0.85
PTPN18-206ENST00000460992 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 BABAM1Q9NWV8 329 aa9.74□□□□□ -0.85
PTPN18-206ENST00000460992 GNAI1P63096 354 aa9.73□□□□□ -0.85
PTPN18-206ENST00000460992 DDR1Q08345 913 aa9.73□□□□□ -0.85
PTPN18-206ENST00000460992 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
PTPN18-206ENST00000460992 FHDC1Q9C0D6 1143 aaPredicted RBP9.73□□□□□ -0.85
PTPN18-206ENST00000460992 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
PTPN18-206ENST00000460992 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 MYL6BP14649 208 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 EIF2S2P20042 333 aaKnown RBP9.72□□□□□ -0.85
PTPN18-206ENST00000460992 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 DZIP3Q86Y13 1208 aaKnown RBP9.72□□□□□ -0.85
PTPN18-206ENST00000460992 NLGN2Q8NFZ4 835 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 CHPF2Q9P2E5 772 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 TBC1D2BQ9UPU7 963 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 ATP10DQ9P241 1426 aa9.72□□□□□ -0.85
PTPN18-206ENST00000460992 DDX60Q8IY21 1712 aaKnown RBP9.71□□□□□ -0.85
PTPN18-206ENST00000460992 ARFGEF1Q9Y6D6 1849 aa9.71□□□□□ -0.85
PTPN18-206ENST00000460992 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.86
PTPN18-206ENST00000460992 ZPR1O75312 459 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 BCAR3O75815 825 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 NFKBIBQ15653 356 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 LRP10Q7Z4F1 713 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 SPINK5Q9NQ38 1064 aaPredicted RBP9.71□□□□□ -0.86
PTPN18-206ENST00000460992 CACNA1FO60840 1977 aa9.71□□□□□ -0.86
PTPN18-206ENST00000460992 A0A087WZG4 1122 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 POLRMTO00411 1230 aaKnown RBP9.7□□□□□ -0.86
PTPN18-206ENST00000460992 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
PTPN18-206ENST00000460992 HOXB7P09629 217 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 NFIXQ14938 502 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 BICDL1Q6ZP65 573 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 TSPYL6Q8N831 410 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 C8orf58Q8NAV2 365 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 DDX19BQ9UMR2 479 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
PTPN18-206ENST00000460992 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
PTPN18-206ENST00000460992 HDAC1Q13547 482 aaPredicted RBP9.69□□□□□ -0.86
PTPN18-206ENST00000460992 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms