RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
SMARCD3-204ENST00000460431 PDIA6Q15084 440 aa21.42■■□□□ 1.02
SMARCD3-204ENST00000460431 MYL6BP14649 208 aa21.41■■□□□ 1.02
SMARCD3-204ENST00000460431 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
SMARCD3-204ENST00000460431 NUP98P52948 1817 aa21.41■■□□□ 1.02
SMARCD3-204ENST00000460431 HOXB7P09629 217 aa21.4■■□□□ 1.02
SMARCD3-204ENST00000460431 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
SMARCD3-204ENST00000460431 SETDB2Q96T68 719 aa21.4■■□□□ 1.02
SMARCD3-204ENST00000460431 GPBP1L1Q9HC44 474 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-204ENST00000460431 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
SMARCD3-204ENST00000460431 ERVV-1B6SEH8 477 aa21.39■■□□□ 1.01
SMARCD3-204ENST00000460431 BRCA1P38398 1863 aaKnown RBP21.39■■□□□ 1.01
SMARCD3-204ENST00000460431 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 HLFQ16534 295 aa21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 DUSP27Q5VZP5 1158 aa21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 TTLL7Q6ZT98 887 aa21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 ZNF526Q8TF50 670 aaPredicted RBP21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 PIM2Q9P1W9 311 aa21.38■■□□□ 1.01
SMARCD3-204ENST00000460431 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
SMARCD3-204ENST00000460431 PROSER3Q2NL68 480 aa21.37■■□□□ 1.01
SMARCD3-204ENST00000460431 ARHGAP27Q6ZUM4 889 aa21.37■■□□□ 1.01
SMARCD3-204ENST00000460431 NECTIN2Q92692 538 aa21.37■■□□□ 1.01
SMARCD3-204ENST00000460431 IL16Q14005 1332 aa21.36■■□□□ 1.01
SMARCD3-204ENST00000460431 ANXA1P04083 346 aa21.36■■□□□ 1.01
SMARCD3-204ENST00000460431 CHRNA5P30532 468 aa21.36■■□□□ 1.01
SMARCD3-204ENST00000460431 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
SMARCD3-204ENST00000460431 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMARCD3-204ENST00000460431 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
SMARCD3-204ENST00000460431 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
SMARCD3-204ENST00000460431 SALL2Q9Y467 1007 aaPredicted RBP21.35■■□□□ 1.01
SMARCD3-204ENST00000460431 DALRD3Q5D0E6 543 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-204ENST00000460431 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
SMARCD3-204ENST00000460431 WDR63Q8IWG1 891 aa21.34■■□□□ 1.01
SMARCD3-204ENST00000460431 NIP7Q9Y221 180 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMARCD3-204ENST00000460431 ANKRD31Q8N7Z5 1873 aa21.34■■□□□ 1.01
SMARCD3-204ENST00000460431 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
SMARCD3-204ENST00000460431 ZBTB3Q9H5J0 574 aa21.33■■□□□ 1.01
SMARCD3-204ENST00000460431 CHPF2Q9P2E5 772 aa21.33■■□□□ 1.01
SMARCD3-204ENST00000460431 ELL2O00472 640 aaPredicted RBP21.32■■□□□ 1
SMARCD3-204ENST00000460431 GIGYF2Q6Y7W6 1299 aaKnown RBP21.32■■□□□ 1
SMARCD3-204ENST00000460431 COPS6Q7L5N1 327 aa21.32■■□□□ 1
SMARCD3-204ENST00000460431 CNBD1Q8NA66 436 aa21.32■■□□□ 1
SMARCD3-204ENST00000460431 BRIP1Q9BX63 1249 aa21.32■■□□□ 1
SMARCD3-204ENST00000460431 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
SMARCD3-204ENST00000460431 NBPF5PQ86XG9 351 aaPredicted RBP21.31■■□□□ 1
SMARCD3-204ENST00000460431 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
SMARCD3-204ENST00000460431 ARFGEF1Q9Y6D6 1849 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 KIF3CO14782 793 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 DIEXFQ68CQ4 756 aaKnown RBP21.3■■□□□ 1
SMARCD3-204ENST00000460431 TPTE2Q6XPS3 522 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 XAGE3Q8WTP9 111 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
SMARCD3-204ENST00000460431 PDE6BP35913 854 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 AIMP1Q12904 312 aaKnown RBP21.29■■□□□ 1
SMARCD3-204ENST00000460431 ZNF34Q8IZ26 560 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 TSPYL6Q8N831 410 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 HYPKQ9NX55 129 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
SMARCD3-204ENST00000460431 H0YIN7 160 aa21.28■■□□□ 1
SMARCD3-204ENST00000460431 NPHP1O15259 732 aa21.28■■□□□ 1
SMARCD3-204ENST00000460431 ST5P78524 1137 aa21.28■■□□□ 1
SMARCD3-204ENST00000460431 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
SMARCD3-204ENST00000460431 C9orf131Q5VYM1 1079 aa21.27■■□□□ 1
SMARCD3-204ENST00000460431 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
SMARCD3-204ENST00000460431 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 GPTP24298 496 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 NYXQ9GZU5 481 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
SMARCD3-204ENST00000460431 PARP10Q53GL7 1025 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 SUSD4Q5VX71 490 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 ANKRD13DQ6ZTN6 518 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 PLBD2Q8NHP8 589 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 CACNA1FO60840 1977 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
SMARCD3-204ENST00000460431 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 TCIRG1Q13488 830 aa21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 TTLL6Q8N841 843 aa21.23■□□□□ 0.99
SMARCD3-204ENST00000460431 SRGNP10124 158 aa21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 GOLGA2Q08379 1002 aa21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 MIER1Q8N108 512 aa21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 NMRK2Q9NPI5 230 aa21.22■□□□□ 0.99
SMARCD3-204ENST00000460431 HSPA6P17066 643 aa21.21■□□□□ 0.99
SMARCD3-204ENST00000460431 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
SMARCD3-204ENST00000460431 ZNF622Q969S3 477 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMARCD3-204ENST00000460431 RNF181Q9P0P0 153 aa21.21■□□□□ 0.99
SMARCD3-204ENST00000460431 NTSR2O95665 410 aa21.2■□□□□ 0.98
SMARCD3-204ENST00000460431 ERFEQ4G0M1 354 aa21.2■□□□□ 0.98
SMARCD3-204ENST00000460431 STYK1Q6J9G0 422 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms