RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 ARXQ96QS3 562 aa13.55□□□□□ -0.24
HLA-DQB1-207ENST00000460185 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
HLA-DQB1-207ENST00000460185 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-207ENST00000460185 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-207ENST00000460185 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-207ENST00000460185 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
HLA-DQB1-207ENST00000460185 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
HLA-DQB1-207ENST00000460185 IER5LQ5T953 404 aa13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
HLA-DQB1-207ENST00000460185 A0A087WZG4 1122 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 APAF1O14727 1248 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ZPR1O75312 459 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 USP42Q9H9J4 1324 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-207ENST00000460185 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
HLA-DQB1-207ENST00000460185 KCNQ3O43525 872 aa13.5□□□□□ -0.25
HLA-DQB1-207ENST00000460185 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-207ENST00000460185 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-207ENST00000460185 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-207ENST00000460185 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
HLA-DQB1-207ENST00000460185 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
HLA-DQB1-207ENST00000460185 GYS1P13807 737 aa13.48□□□□□ -0.25
HLA-DQB1-207ENST00000460185 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-207ENST00000460185 NARFQ9UHQ1 456 aa13.48□□□□□ -0.25
HLA-DQB1-207ENST00000460185 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
HLA-DQB1-207ENST00000460185 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 MMP10P09238 476 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 GNAI1P63096 354 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 NUP98P52948 1817 aa13.47□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 CHD4Q14839 1912 aa13.46□□□□□ -0.25
HLA-DQB1-207ENST00000460185 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CHL1O00533 1208 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 A1BGP04217 495 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 ZNF467Q7Z7K2 595 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
HLA-DQB1-207ENST00000460185 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 HOXB7P09629 217 aa13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
HLA-DQB1-207ENST00000460185 RGL2O15211 777 aa13.43□□□□□ -0.26
HLA-DQB1-207ENST00000460185 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-207ENST00000460185 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
HLA-DQB1-207ENST00000460185 PLCG2P16885 1265 aa13.42□□□□□ -0.26
HLA-DQB1-207ENST00000460185 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
HLA-DQB1-207ENST00000460185 IL16Q14005 1332 aa13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 ARFGEF2Q9Y6D5 1785 aa13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
HLA-DQB1-207ENST00000460185 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 NPHP1O15259 732 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 MYL6BP14649 208 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
HLA-DQB1-207ENST00000460185 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-207ENST00000460185 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
HLA-DQB1-207ENST00000460185 DDR1Q08345 913 aa13.39□□□□□ -0.27
HLA-DQB1-207ENST00000460185 NFIXQ14938 502 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms