RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ELL2O00472 640 aaPredicted RBP13.03□□□□□ -0.32
ATG4A-206ENST00000457035 GYS1P13807 737 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
ATG4A-206ENST00000457035 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 COL15A1P39059 1388 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
ATG4A-206ENST00000457035 A0A087WZG4 1122 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 POLD1P28340 1107 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 SLFN5Q08AF3 891 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 FKBP8Q14318 412 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
ATG4A-206ENST00000457035 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
ATG4A-206ENST00000457035 ZPR1O75312 459 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 PROSER3Q2NL68 480 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 TRMT2AQ8IZ69 625 aaKnown RBP13.01□□□□□ -0.33
ATG4A-206ENST00000457035 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
ATG4A-206ENST00000457035 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 NECTIN2Q92692 538 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
ATG4A-206ENST00000457035 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
ATG4A-206ENST00000457035 E9PSI1 815 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 VAMP4O75379 141 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 ANXA1P04083 346 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 MYL6BP14649 208 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
ATG4A-206ENST00000457035 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
ATG4A-206ENST00000457035 GPR162Q16538 588 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
ATG4A-206ENST00000457035 ZNF784Q8NCA9 323 aaPredicted RBP13□□□□□ -0.33
ATG4A-206ENST00000457035 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
ATG4A-206ENST00000457035 NUP98P52948 1817 aa12.99□□□□□ -0.33
ATG4A-206ENST00000457035 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
ATG4A-206ENST00000457035 TM4SF1P30408 202 aa12.99□□□□□ -0.33
ATG4A-206ENST00000457035 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
ATG4A-206ENST00000457035 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
ATG4A-206ENST00000457035 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
ATG4A-206ENST00000457035 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
ATG4A-206ENST00000457035 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
ATG4A-206ENST00000457035 DBF4Q9UBU7 674 aaPredicted RBP12.98□□□□□ -0.33
ATG4A-206ENST00000457035 HAX1O00165 279 aa12.97□□□□□ -0.33
ATG4A-206ENST00000457035 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
ATG4A-206ENST00000457035 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
ATG4A-206ENST00000457035 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
ATG4A-206ENST00000457035 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
ATG4A-206ENST00000457035 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 RGL2O15211 777 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 MMP10P09238 476 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 HLFQ16534 295 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
ATG4A-206ENST00000457035 BCORQ6W2J9 1755 aa12.96□□□□□ -0.34
ATG4A-206ENST00000457035 UTRNP46939 3433 aa12.95□□□□□ -0.34
ATG4A-206ENST00000457035 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
ATG4A-206ENST00000457035 MAP3K15Q6ZN16 1313 aa12.95□□□□□ -0.34
ATG4A-206ENST00000457035 NFIXQ14938 502 aa12.95□□□□□ -0.34
ATG4A-206ENST00000457035 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
ATG4A-206ENST00000457035 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
ATG4A-206ENST00000457035 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
ATG4A-206ENST00000457035 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
ATG4A-206ENST00000457035 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
ATG4A-206ENST00000457035 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
ATG4A-206ENST00000457035 DDR1Q08345 913 aa12.94□□□□□ -0.34
ATG4A-206ENST00000457035 AIMP1Q12904 312 aaKnown RBP12.94□□□□□ -0.34
ATG4A-206ENST00000457035 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
ATG4A-206ENST00000457035 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
ATG4A-206ENST00000457035 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
ATG4A-206ENST00000457035 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
ATG4A-206ENST00000457035 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 G2E3Q7L622 706 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 ZNF652Q9Y2D9 606 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
ATG4A-206ENST00000457035 SERPINB2P05120 415 aa12.91□□□□□ -0.34
ATG4A-206ENST00000457035 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
ATG4A-206ENST00000457035 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
ATG4A-206ENST00000457035 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
ATG4A-206ENST00000457035 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
ATG4A-206ENST00000457035 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
ATG4A-206ENST00000457035 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
ATG4A-206ENST00000457035 NIP7Q9Y221 180 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATG4A-206ENST00000457035 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
ATG4A-206ENST00000457035 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
ATG4A-206ENST00000457035 CT47B1P0C2W7 299 aaPredicted RBP12.89□□□□□ -0.35
ATG4A-206ENST00000457035 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATG4A-206ENST00000457035 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
ATG4A-206ENST00000457035 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 FLIIQ13045 1269 aa12.88□□□□□ -0.35
ATG4A-206ENST00000457035 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms