RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 PROSER3Q2NL68 480 aa14.75□□□□□ -0.05
HDAC9-217ENST00000455069 ARFGEF1Q9Y6D6 1849 aa14.74□□□□□ -0.05
HDAC9-217ENST00000455069 ANXA1P04083 346 aa14.74□□□□□ -0.05
HDAC9-217ENST00000455069 MYL6BP14649 208 aa14.74□□□□□ -0.05
HDAC9-217ENST00000455069 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
HDAC9-217ENST00000455069 BICDL1Q6ZP65 573 aa14.74□□□□□ -0.05
HDAC9-217ENST00000455069 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
HDAC9-217ENST00000455069 SERPINB2P05120 415 aa14.73□□□□□ -0.05
HDAC9-217ENST00000455069 GNAI1P63096 354 aa14.73□□□□□ -0.05
HDAC9-217ENST00000455069 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
HDAC9-217ENST00000455069 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
HDAC9-217ENST00000455069 NECTIN2Q92692 538 aa14.73□□□□□ -0.05
HDAC9-217ENST00000455069 C1QTNF8P60827 252 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 HLFQ16534 295 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 DUSP27Q5VZP5 1158 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
HDAC9-217ENST00000455069 TSR2Q969E8 191 aaKnown RBP14.72□□□□□ -0.05
HDAC9-217ENST00000455069 WWC3Q9ULE0 1092 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 SALL2Q9Y467 1007 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-217ENST00000455069 ARFGEF2Q9Y6D5 1785 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
HDAC9-217ENST00000455069 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
HDAC9-217ENST00000455069 HOXB7P09629 217 aa14.71□□□□□ -0.05
HDAC9-217ENST00000455069 KCNA3P22001 575 aa14.71□□□□□ -0.05
HDAC9-217ENST00000455069 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.06
HDAC9-217ENST00000455069 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 A0A0G2JLW4 131 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 RGL2O15211 777 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 DPEP1P16444 411 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 TGFB2P61812 414 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 HDGFL1Q5TGJ6 251 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 CLEC4GQ6UXB4 293 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
HDAC9-217ENST00000455069 IL16Q14005 1332 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 CHRNA5P30532 468 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 DIEXFQ68CQ4 756 aaKnown RBP14.69□□□□□ -0.06
HDAC9-217ENST00000455069 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 CCDC24Q8N4L8 307 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 ZBTB3Q9H5J0 574 aa14.69□□□□□ -0.06
HDAC9-217ENST00000455069 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
HDAC9-217ENST00000455069 DDX21Q9NR30 783 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC9-217ENST00000455069 ZNF521Q96K83 1311 aa14.68□□□□□ -0.06
HDAC9-217ENST00000455069 ERVV-1B6SEH8 477 aa14.68□□□□□ -0.06
HDAC9-217ENST00000455069 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
HDAC9-217ENST00000455069 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
HDAC9-217ENST00000455069 ZNF652Q9Y2D9 606 aa14.68□□□□□ -0.06
HDAC9-217ENST00000455069 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 FANCIQ9NVI1 1328 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
HDAC9-217ENST00000455069 KIF6Q6ZMV9 814 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 NIP7Q9Y221 180 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC9-217ENST00000455069 ADCY9O60503 1353 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 CACNA1FO60840 1977 aa14.67□□□□□ -0.06
HDAC9-217ENST00000455069 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
HDAC9-217ENST00000455069 WDR63Q8IWG1 891 aa14.66□□□□□ -0.06
HDAC9-217ENST00000455069 MIER1Q8N108 512 aa14.66□□□□□ -0.06
HDAC9-217ENST00000455069 LAMB2P55268 1798 aa14.65□□□□□ -0.06
HDAC9-217ENST00000455069 ABCC12Q96J65 1359 aa14.65□□□□□ -0.06
HDAC9-217ENST00000455069 AIMP1Q12904 312 aaKnown RBP14.65□□□□□ -0.06
HDAC9-217ENST00000455069 GIGYF2Q6Y7W6 1299 aaKnown RBP14.65□□□□□ -0.06
HDAC9-217ENST00000455069 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
HDAC9-217ENST00000455069 DBF4Q9UBU7 674 aaPredicted RBP14.65□□□□□ -0.06
HDAC9-217ENST00000455069 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
HDAC9-217ENST00000455069 GPTP24298 496 aa14.64□□□□□ -0.07
HDAC9-217ENST00000455069 NBPF5PQ86XG9 351 aaPredicted RBP14.64□□□□□ -0.07
HDAC9-217ENST00000455069 ZNF34Q8IZ26 560 aa14.64□□□□□ -0.07
HDAC9-217ENST00000455069 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
HDAC9-217ENST00000455069 FAM177BA6PVY3 158 aa14.63□□□□□ -0.07
HDAC9-217ENST00000455069 BRIP1Q9BX63 1249 aa14.63□□□□□ -0.07
HDAC9-217ENST00000455069 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
HDAC9-217ENST00000455069 BCS1LQ9Y276 419 aa14.63□□□□□ -0.07
HDAC9-217ENST00000455069 DDX60Q8IY21 1712 aaKnown RBP14.63□□□□□ -0.07
HDAC9-217ENST00000455069 SBF1O95248 1867 aa14.63□□□□□ -0.07
HDAC9-217ENST00000455069 TWISTNBQ3B726 338 aaPredicted RBP14.62□□□□□ -0.07
HDAC9-217ENST00000455069 SUSD4Q5VX71 490 aa14.62□□□□□ -0.07
HDAC9-217ENST00000455069 C2CD5Q86YS7 1000 aa14.62□□□□□ -0.07
HDAC9-217ENST00000455069 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
HDAC9-217ENST00000455069 PIM2Q9P1W9 311 aa14.62□□□□□ -0.07
HDAC9-217ENST00000455069 CEP350Q5VT06 3117 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 NTSR2O95665 410 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 ST5P78524 1137 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 PLBD2Q8NHP8 589 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 CCDC88AQ3V6T2 1871 aa14.61□□□□□ -0.07
HDAC9-217ENST00000455069 RIC1Q4ADV7 1423 aa14.6□□□□□ -0.07
HDAC9-217ENST00000455069 TCERG1O14776 1098 aaKnown RBP14.6□□□□□ -0.07
HDAC9-217ENST00000455069 NPHP1O15259 732 aa14.6□□□□□ -0.07
HDAC9-217ENST00000455069 PDE6BP35913 854 aa14.6□□□□□ -0.07
HDAC9-217ENST00000455069 EXOSC9Q06265 439 aaKnown RBP14.6□□□□□ -0.07
HDAC9-217ENST00000455069 CCDC30Q5VVM6 783 aa14.6□□□□□ -0.07
HDAC9-217ENST00000455069 TPTE2Q6XPS3 522 aa14.6□□□□□ -0.07
HDAC9-217ENST00000455069 GPBP1L1Q9HC44 474 aaPredicted RBP14.6□□□□□ -0.07
HDAC9-217ENST00000455069 KLRG2A4D1S0 409 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-217ENST00000455069 H0YIN7 160 aa14.59□□□□□ -0.07
HDAC9-217ENST00000455069 SRGNP10124 158 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms