RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MIER1Q8N108 512 aa18.4■□□□□ 0.54
HDAC4-205ENST00000454542 KLHL34Q8N239 644 aa18.4■□□□□ 0.54
HDAC4-205ENST00000454542 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
HDAC4-205ENST00000454542 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
HDAC4-205ENST00000454542 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-205ENST00000454542 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
HDAC4-205ENST00000454542 MYL6BP14649 208 aa18.39■□□□□ 0.53
HDAC4-205ENST00000454542 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
HDAC4-205ENST00000454542 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
HDAC4-205ENST00000454542 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
HDAC4-205ENST00000454542 ARFGEF2Q9Y6D5 1785 aa18.38■□□□□ 0.53
HDAC4-205ENST00000454542 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
HDAC4-205ENST00000454542 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-205ENST00000454542 UTRNP46939 3433 aa18.37■□□□□ 0.53
HDAC4-205ENST00000454542 ANXA1P04083 346 aa18.37■□□□□ 0.53
HDAC4-205ENST00000454542 SERPINB2P05120 415 aa18.37■□□□□ 0.53
HDAC4-205ENST00000454542 HLFQ16534 295 aa18.37■□□□□ 0.53
HDAC4-205ENST00000454542 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-205ENST00000454542 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
HDAC4-205ENST00000454542 TGFB2P61812 414 aa18.36■□□□□ 0.53
HDAC4-205ENST00000454542 KIF6Q6ZMV9 814 aa18.36■□□□□ 0.53
HDAC4-205ENST00000454542 TSPYL6Q8N831 410 aa18.36■□□□□ 0.53
HDAC4-205ENST00000454542 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-205ENST00000454542 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
HDAC4-205ENST00000454542 TNRC6CQ9HCJ0 1690 aaKnown RBP18.35■□□□□ 0.53
HDAC4-205ENST00000454542 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
HDAC4-205ENST00000454542 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
HDAC4-205ENST00000454542 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-205ENST00000454542 PRR5LQ6MZQ0 368 aa18.34■□□□□ 0.53
HDAC4-205ENST00000454542 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
HDAC4-205ENST00000454542 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
HDAC4-205ENST00000454542 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
HDAC4-205ENST00000454542 XAGE3Q8WTP9 111 aa18.33■□□□□ 0.52
HDAC4-205ENST00000454542 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
HDAC4-205ENST00000454542 CACNA1FO60840 1977 aa18.33■□□□□ 0.52
HDAC4-205ENST00000454542 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
HDAC4-205ENST00000454542 YBX3P16989 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
HDAC4-205ENST00000454542 KCNA3P22001 575 aa18.32■□□□□ 0.52
HDAC4-205ENST00000454542 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-205ENST00000454542 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
HDAC4-205ENST00000454542 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
HDAC4-205ENST00000454542 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
HDAC4-205ENST00000454542 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-205ENST00000454542 DPEP1P16444 411 aa18.31■□□□□ 0.52
HDAC4-205ENST00000454542 ZNF34Q8IZ26 560 aa18.31■□□□□ 0.52
HDAC4-205ENST00000454542 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
HDAC4-205ENST00000454542 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
HDAC4-205ENST00000454542 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
HDAC4-205ENST00000454542 CHD4Q14839 1912 aa18.3■□□□□ 0.52
HDAC4-205ENST00000454542 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
HDAC4-205ENST00000454542 LAMB2P55268 1798 aa18.3■□□□□ 0.52
HDAC4-205ENST00000454542 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
HDAC4-205ENST00000454542 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
HDAC4-205ENST00000454542 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
HDAC4-205ENST00000454542 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
HDAC4-205ENST00000454542 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
HDAC4-205ENST00000454542 NBPF5PQ86XG9 351 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-205ENST00000454542 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
HDAC4-205ENST00000454542 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 E9PSI1 815 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 VAMP4O75379 141 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 NTSR2O95665 410 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 CHRNA5P30532 468 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 ST5P78524 1137 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
HDAC4-205ENST00000454542 PARP10Q53GL7 1025 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
HDAC4-205ENST00000454542 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
HDAC4-205ENST00000454542 KLRG2A4D1S0 409 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-205ENST00000454542 GPR162Q16538 588 aa18.26■□□□□ 0.51
HDAC4-205ENST00000454542 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
HDAC4-205ENST00000454542 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
HDAC4-205ENST00000454542 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
HDAC4-205ENST00000454542 GPTP24298 496 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 TPTE2Q6XPS3 522 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
HDAC4-205ENST00000454542 ISCA1Q9BUE6 129 aa18.25■□□□□ 0.51
HDAC4-205ENST00000454542 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 PDE6BP35913 854 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 ADCY9O60503 1353 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
HDAC4-205ENST00000454542 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
HDAC4-205ENST00000454542 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
HDAC4-205ENST00000454542 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
HDAC4-205ENST00000454542 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
HDAC4-205ENST00000454542 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
HDAC4-205ENST00000454542 H0YIN7 160 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 SRGNP10124 158 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 CRY2Q49AN0 593 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 WWC3Q9ULE0 1092 aa18.21■□□□□ 0.51
HDAC4-205ENST00000454542 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms