RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 GYS1P13807 737 aa22.77■■□□□ 1.24
HLCS-205ENST00000448340 BCS1LQ9Y276 419 aa22.77■■□□□ 1.24
HLCS-205ENST00000448340 TOMM70O94826 608 aa22.76■■□□□ 1.23
HLCS-205ENST00000448340 KCNA3P22001 575 aa22.76■■□□□ 1.23
HLCS-205ENST00000448340 APLP1P51693 650 aa22.76■■□□□ 1.23
HLCS-205ENST00000448340 COL15A1P39059 1388 aa22.76■■□□□ 1.23
HLCS-205ENST00000448340 A0A087WZG4 1122 aa22.75■■□□□ 1.23
HLCS-205ENST00000448340 VAMP4O75379 141 aa22.75■■□□□ 1.23
HLCS-205ENST00000448340 DPEP1P16444 411 aa22.75■■□□□ 1.23
HLCS-205ENST00000448340 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
HLCS-205ENST00000448340 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
HLCS-205ENST00000448340 NECTIN2Q92692 538 aa22.75■■□□□ 1.23
HLCS-205ENST00000448340 RFC4P35249 363 aa22.74■■□□□ 1.23
HLCS-205ENST00000448340 PDIA6Q15084 440 aa22.74■■□□□ 1.23
HLCS-205ENST00000448340 CCDC30Q5VVM6 783 aa22.74■■□□□ 1.23
HLCS-205ENST00000448340 DDX21Q9NR30 783 aaKnown RBP eCLIP22.74■■□□□ 1.23
HLCS-205ENST00000448340 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
HLCS-205ENST00000448340 ARHGAP27Q6ZUM4 889 aa22.73■■□□□ 1.23
HLCS-205ENST00000448340 ZNF330Q9Y3S2 320 aaPredicted RBP22.73■■□□□ 1.23
HLCS-205ENST00000448340 C4AP0C0L4 1744 aa22.72■■□□□ 1.23
HLCS-205ENST00000448340 MYL6BP14649 208 aa22.72■■□□□ 1.23
HLCS-205ENST00000448340 NMRK2Q9NPI5 230 aa22.72■■□□□ 1.23
HLCS-205ENST00000448340 CHPF2Q9P2E5 772 aa22.72■■□□□ 1.23
HLCS-205ENST00000448340 NARFQ9UHQ1 456 aa22.71■■□□□ 1.23
HLCS-205ENST00000448340 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
HLCS-205ENST00000448340 PROSER3Q2NL68 480 aa22.7■■□□□ 1.22
HLCS-205ENST00000448340 LRP10Q7Z4F1 713 aa22.7■■□□□ 1.22
HLCS-205ENST00000448340 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
HLCS-205ENST00000448340 ZPR1O75312 459 aa22.69■■□□□ 1.22
HLCS-205ENST00000448340 ANXA1P04083 346 aa22.69■■□□□ 1.22
HLCS-205ENST00000448340 CT47B1P0C2W7 299 aaPredicted RBP22.69■■□□□ 1.22
HLCS-205ENST00000448340 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
HLCS-205ENST00000448340 STK31Q9BXU1 1019 aa22.69■■□□□ 1.22
HLCS-205ENST00000448340 HYPKQ9NX55 129 aa22.69■■□□□ 1.22
HLCS-205ENST00000448340 PARP3Q9Y6F1 533 aa22.69■■□□□ 1.22
HLCS-205ENST00000448340 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
HLCS-205ENST00000448340 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
HLCS-205ENST00000448340 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
HLCS-205ENST00000448340 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
HLCS-205ENST00000448340 CACNA1FO60840 1977 aa22.67■■□□□ 1.22
HLCS-205ENST00000448340 C9orf131Q5VYM1 1079 aa22.66■■□□□ 1.22
HLCS-205ENST00000448340 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
HLCS-205ENST00000448340 RBM46Q8TBY0 533 aaKnown RBP22.66■■□□□ 1.22
HLCS-205ENST00000448340 FKBP8Q14318 412 aa22.65■■□□□ 1.22
HLCS-205ENST00000448340 COPS6Q7L5N1 327 aa22.65■■□□□ 1.22
HLCS-205ENST00000448340 PIM2Q9P1W9 311 aa22.65■■□□□ 1.22
HLCS-205ENST00000448340 TCERG1O14776 1098 aaKnown RBP22.64■■□□□ 1.21
HLCS-205ENST00000448340 RGL2O15211 777 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 CAMTA2O94983 1202 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 SLC4A2P04920 1241 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 DDR1Q08345 913 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 KIF6Q6ZMV9 814 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 TTLL7Q6ZT98 887 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 XAGE3Q8WTP9 111 aa22.64■■□□□ 1.21
HLCS-205ENST00000448340 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.21
HLCS-205ENST00000448340 SCN7AQ01118 1682 aa22.63■■□□□ 1.21
HLCS-205ENST00000448340 ERVV-1B6SEH8 477 aa22.63■■□□□ 1.21
HLCS-205ENST00000448340 MAP3K15Q6ZN16 1313 aa22.62■■□□□ 1.21
HLCS-205ENST00000448340 AIMP1Q12904 312 aaKnown RBP22.62■■□□□ 1.21
HLCS-205ENST00000448340 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
HLCS-205ENST00000448340 PHAXQ9H814 394 aaKnown RBP22.62■■□□□ 1.21
HLCS-205ENST00000448340 BCL2L12Q9HB09 334 aa22.62■■□□□ 1.21
HLCS-205ENST00000448340 BCORQ6W2J9 1755 aa22.62■■□□□ 1.21
HLCS-205ENST00000448340 TM4SF1P30408 202 aa22.61■■□□□ 1.21
HLCS-205ENST00000448340 ALDH1L2Q3SY69 923 aa22.61■■□□□ 1.21
HLCS-205ENST00000448340 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
HLCS-205ENST00000448340 FSTL1Q12841 308 aa22.6■■□□□ 1.21
HLCS-205ENST00000448340 DALRD3Q5D0E6 543 aaKnown RBP22.6■■□□□ 1.21
HLCS-205ENST00000448340 HTRA3P83110 453 aa22.59■■□□□ 1.21
HLCS-205ENST00000448340 ANKRD13DQ6ZTN6 518 aa22.59■■□□□ 1.21
HLCS-205ENST00000448340 JMYQ8N9B5 988 aa22.59■■□□□ 1.21
HLCS-205ENST00000448340 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
HLCS-205ENST00000448340 POLRMTO00411 1230 aaKnown RBP22.58■■□□□ 1.21
HLCS-205ENST00000448340 CHRNA5P30532 468 aa22.58■■□□□ 1.21
HLCS-205ENST00000448340 HLFQ16534 295 aa22.58■■□□□ 1.21
HLCS-205ENST00000448340 PLBD2Q8NHP8 589 aa22.58■■□□□ 1.21
HLCS-205ENST00000448340 SSH1Q8WYL5 1049 aa22.58■■□□□ 1.21
HLCS-205ENST00000448340 KLRG1Q96E93 195 aa22.58■■□□□ 1.21
HLCS-205ENST00000448340 NUP98P52948 1817 aa22.57■■□□□ 1.2
HLCS-205ENST00000448340 DDX58O95786 925 aaKnown RBP22.57■■□□□ 1.2
HLCS-205ENST00000448340 GIGYF2Q6Y7W6 1299 aaKnown RBP22.57■■□□□ 1.2
HLCS-205ENST00000448340 G2E3Q7L622 706 aa22.57■■□□□ 1.2
HLCS-205ENST00000448340 MRPL50Q8N5N7 158 aaKnown RBP22.57■■□□□ 1.2
HLCS-205ENST00000448340 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
HLCS-205ENST00000448340 ARFGEF1Q9Y6D6 1849 aa22.57■■□□□ 1.2
HLCS-205ENST00000448340 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
HLCS-205ENST00000448340 FLIIQ13045 1269 aa22.56■■□□□ 1.2
HLCS-205ENST00000448340 NFIXQ14938 502 aa22.55■■□□□ 1.2
HLCS-205ENST00000448340 TBC1D9BQ66K14 1250 aa22.55■■□□□ 1.2
HLCS-205ENST00000448340 RRAGCQ9HB90 399 aa22.55■■□□□ 1.2
HLCS-205ENST00000448340 KDM2BQ8NHM5 1336 aa22.55■■□□□ 1.2
HLCS-205ENST00000448340 HSP90AB3PQ58FF7 597 aa22.54■■□□□ 1.2
HLCS-205ENST00000448340 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
HLCS-205ENST00000448340 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
HLCS-205ENST00000448340 SMC4Q9NTJ3 1288 aa22.54■■□□□ 1.2
HLCS-205ENST00000448340 BRPF1P55201 1214 aaPredicted RBP22.53■■□□□ 1.2
HLCS-205ENST00000448340 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
HLCS-205ENST00000448340 KSR2Q6VAB6 950 aa22.53■■□□□ 1.2
HLCS-205ENST00000448340 SETDB2Q96T68 719 aa22.53■■□□□ 1.2
HLCS-205ENST00000448340 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms