RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 APLP1P51693 650 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 TGFB2P61812 414 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 PDIA6Q15084 440 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 ZPR1O75312 459 aa18.34■□□□□ 0.53
SREBF1-207ENST00000447641 TOMM70O94826 608 aa18.34■□□□□ 0.53
SREBF1-207ENST00000447641 DPEP1P16444 411 aa18.34■□□□□ 0.53
SREBF1-207ENST00000447641 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
SREBF1-207ENST00000447641 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
SREBF1-207ENST00000447641 TM4SF1P30408 202 aa18.33■□□□□ 0.52
SREBF1-207ENST00000447641 FKBP8Q14318 412 aa18.33■□□□□ 0.52
SREBF1-207ENST00000447641 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.52
SREBF1-207ENST00000447641 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
SREBF1-207ENST00000447641 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-207ENST00000447641 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
SREBF1-207ENST00000447641 CAMTA2O94983 1202 aa18.32■□□□□ 0.52
SREBF1-207ENST00000447641 TSR2Q969E8 191 aaKnown RBP18.32■□□□□ 0.52
SREBF1-207ENST00000447641 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
SREBF1-207ENST00000447641 RGL2O15211 777 aa18.31■□□□□ 0.52
SREBF1-207ENST00000447641 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
SREBF1-207ENST00000447641 HTRA3P83110 453 aa18.31■□□□□ 0.52
SREBF1-207ENST00000447641 TIAM2Q8IVF5 1701 aa18.31■□□□□ 0.52
SREBF1-207ENST00000447641 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
SREBF1-207ENST00000447641 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
SREBF1-207ENST00000447641 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
SREBF1-207ENST00000447641 ARHGAP27Q6ZUM4 889 aa18.3■□□□□ 0.52
SREBF1-207ENST00000447641 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
SREBF1-207ENST00000447641 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
SREBF1-207ENST00000447641 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
SREBF1-207ENST00000447641 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
SREBF1-207ENST00000447641 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
SREBF1-207ENST00000447641 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-207ENST00000447641 MYL6BP14649 208 aa18.28■□□□□ 0.52
SREBF1-207ENST00000447641 DDR1Q08345 913 aa18.28■□□□□ 0.52
SREBF1-207ENST00000447641 HDGFL1Q5TGJ6 251 aa18.28■□□□□ 0.52
SREBF1-207ENST00000447641 C9orf131Q5VYM1 1079 aa18.28■□□□□ 0.52
SREBF1-207ENST00000447641 CLEC4GQ6UXB4 293 aa18.28■□□□□ 0.52
SREBF1-207ENST00000447641 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
SREBF1-207ENST00000447641 ERVV-1B6SEH8 477 aa18.27■□□□□ 0.52
SREBF1-207ENST00000447641 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-207ENST00000447641 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
SREBF1-207ENST00000447641 NFIXQ14938 502 aa18.27■□□□□ 0.52
SREBF1-207ENST00000447641 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.52
SREBF1-207ENST00000447641 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
SREBF1-207ENST00000447641 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
SREBF1-207ENST00000447641 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-207ENST00000447641 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
SREBF1-207ENST00000447641 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
SREBF1-207ENST00000447641 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
SREBF1-207ENST00000447641 ANXA1P04083 346 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
SREBF1-207ENST00000447641 CHMP4AQ9BY43 222 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 PARP3Q9Y6F1 533 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 NUP98P52948 1817 aa18.25■□□□□ 0.51
SREBF1-207ENST00000447641 MAP3K15Q6ZN16 1313 aa18.24■□□□□ 0.51
SREBF1-207ENST00000447641 E9PSI1 815 aa18.24■□□□□ 0.51
SREBF1-207ENST00000447641 VAMP4O75379 141 aa18.24■□□□□ 0.51
SREBF1-207ENST00000447641 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-207ENST00000447641 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-207ENST00000447641 JMYQ8N9B5 988 aa18.24■□□□□ 0.51
SREBF1-207ENST00000447641 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
SREBF1-207ENST00000447641 EXOSC9Q06265 439 aaKnown RBP18.23■□□□□ 0.51
SREBF1-207ENST00000447641 HLFQ16534 295 aa18.23■□□□□ 0.51
SREBF1-207ENST00000447641 CCDC30Q5VVM6 783 aa18.23■□□□□ 0.51
SREBF1-207ENST00000447641 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
SREBF1-207ENST00000447641 HYPKQ9NX55 129 aa18.23■□□□□ 0.51
SREBF1-207ENST00000447641 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
SREBF1-207ENST00000447641 CHRNA5P30532 468 aa18.22■□□□□ 0.51
SREBF1-207ENST00000447641 COL13A1Q5TAT6 717 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-207ENST00000447641 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
SREBF1-207ENST00000447641 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
SREBF1-207ENST00000447641 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-207ENST00000447641 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
SREBF1-207ENST00000447641 SERPINB2P05120 415 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 PRELPP51888 382 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 GIGYF2Q6Y7W6 1299 aaKnown RBP18.21■□□□□ 0.51
SREBF1-207ENST00000447641 KIF6Q6ZMV9 814 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 CDCA7LQ96GN5 454 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 RNF181Q9P0P0 153 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
SREBF1-207ENST00000447641 RASSF7Q02833 373 aa18.2■□□□□ 0.5
SREBF1-207ENST00000447641 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
SREBF1-207ENST00000447641 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
SREBF1-207ENST00000447641 CARMIL3Q8ND23 1372 aa18.19■□□□□ 0.5
SREBF1-207ENST00000447641 FSTL1Q12841 308 aa18.19■□□□□ 0.5
SREBF1-207ENST00000447641 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
SREBF1-207ENST00000447641 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
SREBF1-207ENST00000447641 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
SREBF1-207ENST00000447641 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
SREBF1-207ENST00000447641 AIMP1Q12904 312 aaKnown RBP18.18■□□□□ 0.5
SREBF1-207ENST00000447641 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
SREBF1-207ENST00000447641 RRAGCQ9HB90 399 aa18.18■□□□□ 0.5
SREBF1-207ENST00000447641 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
SREBF1-207ENST00000447641 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
SREBF1-207ENST00000447641 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
SREBF1-207ENST00000447641 CACNA1SQ13698 1873 aa18.17■□□□□ 0.5
SREBF1-207ENST00000447641 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
SREBF1-207ENST00000447641 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms