RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
SF3A1-203ENST00000444440 TSPYL4Q9UJ04 414 aa14.33□□□□□ -0.12
SF3A1-203ENST00000444440 TAF1P21675 1872 aa14.33□□□□□ -0.12
SF3A1-203ENST00000444440 CEP350Q5VT06 3117 aa14.32□□□□□ -0.12
SF3A1-203ENST00000444440 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
SF3A1-203ENST00000444440 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
SF3A1-203ENST00000444440 TTLL7Q6ZT98 887 aa14.32□□□□□ -0.12
SF3A1-203ENST00000444440 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
SF3A1-203ENST00000444440 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
SF3A1-203ENST00000444440 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
SF3A1-203ENST00000444440 RASSF7Q02833 373 aa14.31□□□□□ -0.12
SF3A1-203ENST00000444440 PROSER3Q2NL68 480 aa14.31□□□□□ -0.12
SF3A1-203ENST00000444440 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
SF3A1-203ENST00000444440 ANXA1P04083 346 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 MYL6BP14649 208 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 PDIA6Q15084 440 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
SF3A1-203ENST00000444440 CNBD1Q8NA66 436 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
SF3A1-203ENST00000444440 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
SF3A1-203ENST00000444440 H0YIN7 160 aa14.29□□□□□ -0.12
SF3A1-203ENST00000444440 C9orf131Q5VYM1 1079 aa14.29□□□□□ -0.12
SF3A1-203ENST00000444440 GPBP1L1Q9HC44 474 aaPredicted RBP14.29□□□□□ -0.12
SF3A1-203ENST00000444440 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.12
SF3A1-203ENST00000444440 ABCC12Q96J65 1359 aa14.29□□□□□ -0.12
SF3A1-203ENST00000444440 DDX60Q8IY21 1712 aaKnown RBP14.29□□□□□ -0.12
SF3A1-203ENST00000444440 CHL1O00533 1208 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 MAP3K15Q6ZN16 1313 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 TTLL6Q8N841 843 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 NECTIN2Q92692 538 aa14.28□□□□□ -0.12
SF3A1-203ENST00000444440 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 NFKBIEO00221 500 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 APAF1O14727 1248 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 KIF3CO14782 793 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 EIF2S2P20042 333 aaKnown RBP14.27□□□□□ -0.13
SF3A1-203ENST00000444440 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.133e-7■□□□□ 10.8
SF3A1-203ENST00000444440 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.13
SF3A1-203ENST00000444440 RGL2O15211 777 aa14.26□□□□□ -0.13
SF3A1-203ENST00000444440 SRGNP10124 158 aa14.26□□□□□ -0.13
SF3A1-203ENST00000444440 PDE6BP35913 854 aa14.26□□□□□ -0.13
SF3A1-203ENST00000444440 ST5P78524 1137 aa14.26□□□□□ -0.13
SF3A1-203ENST00000444440 RNF181Q9P0P0 153 aa14.26□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
SF3A1-203ENST00000444440 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
SF3A1-203ENST00000444440 ERBB4Q15303 1308 aa14.25□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
SF3A1-203ENST00000444440 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
SF3A1-203ENST00000444440 C21orf2O43822 256 aa14.25□□□□□ -0.13
SF3A1-203ENST00000444440 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
SF3A1-203ENST00000444440 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
SF3A1-203ENST00000444440 NPHP1O15259 732 aa14.24□□□□□ -0.13
SF3A1-203ENST00000444440 GPTP24298 496 aa14.24□□□□□ -0.13
SF3A1-203ENST00000444440 WDR90Q96KV7 1748 aa14.24□□□□□ -0.13
SF3A1-203ENST00000444440 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 STYK1Q6J9G0 422 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
SF3A1-203ENST00000444440 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 MASTLQ96GX5 879 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
SF3A1-203ENST00000444440 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
SF3A1-203ENST00000444440 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
SF3A1-203ENST00000444440 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
SF3A1-203ENST00000444440 COL4A1P02462 1669 aa14.22□□□□□ -0.13
SF3A1-203ENST00000444440 RIC1Q4ADV7 1423 aa14.22□□□□□ -0.13
SF3A1-203ENST00000444440 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
SF3A1-203ENST00000444440 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
SF3A1-203ENST00000444440 NTSR2O95665 410 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 LMNB1P20700 586 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 XAGE3Q8WTP9 111 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 C7orf43Q8WVR3 580 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 CFAP44Q96MT7 982 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
SF3A1-203ENST00000444440 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
SF3A1-203ENST00000444440 COPS6Q7L5N1 327 aa14.2□□□□□ -0.14
SF3A1-203ENST00000444440 CNKSR1Q969H4 720 aa14.2□□□□□ -0.14
SF3A1-203ENST00000444440 DDX21Q9NR30 783 aaKnown RBP eCLIP14.2□□□□□ -0.14
SF3A1-203ENST00000444440 COL4A5P29400 1685 aa14.2□□□□□ -0.14
SF3A1-203ENST00000444440 NPR1P16066 1061 aa14.19□□□□□ -0.14
SF3A1-203ENST00000444440 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
SF3A1-203ENST00000444440 ZNF428Q96B54 188 aa14.19□□□□□ -0.14
SF3A1-203ENST00000444440 LRRC37AA6NMS7 1700 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 SPEF2Q9C093 1822 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 MYH3P11055 1940 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 HDGFL1Q5TGJ6 251 aa14.18□□□□□ -0.14
SF3A1-203ENST00000444440 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms