RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 TTLL7Q6ZT98 887 aa23.15■■□□□ 1.3
NCSTN-208ENST00000438008 YY1P25490 414 aa23.14■■□□□ 1.29
NCSTN-208ENST00000438008 PROSER3Q2NL68 480 aa23.14■■□□□ 1.29
NCSTN-208ENST00000438008 DUSP27Q5VZP5 1158 aa23.14■■□□□ 1.29
NCSTN-208ENST00000438008 PRR5LQ6MZQ0 368 aa23.14■■□□□ 1.29
NCSTN-208ENST00000438008 AFDNP55196 1824 aaKnown RBP23.14■■□□□ 1.29
NCSTN-208ENST00000438008 IL16Q14005 1332 aa23.13■■□□□ 1.29
NCSTN-208ENST00000438008 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
NCSTN-208ENST00000438008 SENP3-EIF4A1A0A087X0R7 540 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 HDGFL1Q5TGJ6 251 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 NECTIN2Q92692 538 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 BRIP1Q9BX63 1249 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 PIM2Q9P1W9 311 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 WWC3Q9ULE0 1092 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 NIP7Q9Y221 180 aaKnown RBP eCLIP23.12■■□□□ 1.29
NCSTN-208ENST00000438008 UTRNP46939 3433 aa23.12■■□□□ 1.29
NCSTN-208ENST00000438008 N4BP2Q86UW6 1770 aaPredicted RBP23.12■■□□□ 1.29
NCSTN-208ENST00000438008 ANXA1P04083 346 aa23.11■■□□□ 1.29
NCSTN-208ENST00000438008 CHRNA5P30532 468 aa23.11■■□□□ 1.29
NCSTN-208ENST00000438008 CNBD1Q8NA66 436 aa23.11■■□□□ 1.29
NCSTN-208ENST00000438008 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
NCSTN-208ENST00000438008 WDR63Q8IWG1 891 aa23.1■■□□□ 1.29
NCSTN-208ENST00000438008 BCS1LQ9Y276 419 aa23.1■■□□□ 1.29
NCSTN-208ENST00000438008 ATP10DQ9P241 1426 aa23.09■■□□□ 1.29
NCSTN-208ENST00000438008 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
NCSTN-208ENST00000438008 GIGYF2Q6Y7W6 1299 aaKnown RBP23.09■■□□□ 1.29
NCSTN-208ENST00000438008 NBPF5PQ86XG9 351 aaPredicted RBP23.09■■□□□ 1.29
NCSTN-208ENST00000438008 ZBTB3Q9H5J0 574 aa23.09■■□□□ 1.29
NCSTN-208ENST00000438008 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
NCSTN-208ENST00000438008 DBF4Q9UBU7 674 aaPredicted RBP23.09■■□□□ 1.29
NCSTN-208ENST00000438008 GOLGB1Q14789 3259 aaKnown RBP23.09■■□□□ 1.29
NCSTN-208ENST00000438008 PDE6BP35913 854 aa23.08■■□□□ 1.29
NCSTN-208ENST00000438008 ST5P78524 1137 aa23.08■■□□□ 1.29
NCSTN-208ENST00000438008 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
NCSTN-208ENST00000438008 TPTE2Q6XPS3 522 aa23.08■■□□□ 1.29
NCSTN-208ENST00000438008 COPS6Q7L5N1 327 aa23.08■■□□□ 1.29
NCSTN-208ENST00000438008 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
NCSTN-208ENST00000438008 H0YIN7 160 aa23.07■■□□□ 1.28
NCSTN-208ENST00000438008 C2CD5Q86YS7 1000 aa23.07■■□□□ 1.28
NCSTN-208ENST00000438008 XAGE3Q8WTP9 111 aa23.07■■□□□ 1.28
NCSTN-208ENST00000438008 CHMP4AQ9BY43 222 aa23.07■■□□□ 1.28
NCSTN-208ENST00000438008 NPHP1O15259 732 aa23.06■■□□□ 1.28
NCSTN-208ENST00000438008 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
NCSTN-208ENST00000438008 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
NCSTN-208ENST00000438008 TSR2Q969E8 191 aaKnown RBP23.06■■□□□ 1.28
NCSTN-208ENST00000438008 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
NCSTN-208ENST00000438008 BRCA1P38398 1863 aaKnown RBP23.06■■□□□ 1.28
NCSTN-208ENST00000438008 ELL2O00472 640 aaPredicted RBP23.05■■□□□ 1.28
NCSTN-208ENST00000438008 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
NCSTN-208ENST00000438008 CHD4Q14839 1912 aa23.05■■□□□ 1.28
NCSTN-208ENST00000438008 AIMP1Q12904 312 aaKnown RBP23.04■■□□□ 1.28
NCSTN-208ENST00000438008 NYXQ9GZU5 481 aa23.04■■□□□ 1.28
NCSTN-208ENST00000438008 IBTKQ9P2D0 1353 aaPredicted RBP23.03■■□□□ 1.28
NCSTN-208ENST00000438008 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
NCSTN-208ENST00000438008 UBN2Q6ZU65 1347 aa23.03■■□□□ 1.28
NCSTN-208ENST00000438008 KLRG2A4D1S0 409 aaPredicted RBP23.02■■□□□ 1.28
NCSTN-208ENST00000438008 GPTP24298 496 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 PARP10Q53GL7 1025 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 HSP90AB3PQ58FF7 597 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 TTLL6Q8N841 843 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 NUP98P52948 1817 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 ANKRD31Q8N7Z5 1873 aa23.02■■□□□ 1.28
NCSTN-208ENST00000438008 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
NCSTN-208ENST00000438008 CCDC30Q5VVM6 783 aa23.01■■□□□ 1.27
NCSTN-208ENST00000438008 PLBD2Q8NHP8 589 aa23.01■■□□□ 1.27
NCSTN-208ENST00000438008 SRGNP10124 158 aa23■■□□□ 1.27
NCSTN-208ENST00000438008 SUSD4Q5VX71 490 aa23■■□□□ 1.27
NCSTN-208ENST00000438008 ANKRD13DQ6ZTN6 518 aa23■■□□□ 1.27
NCSTN-208ENST00000438008 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
NCSTN-208ENST00000438008 DLEC1Q9Y238 1755 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 GTF2E1P29083 439 aaPredicted RBP22.99■■□□□ 1.27
NCSTN-208ENST00000438008 TCIRG1Q13488 830 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
NCSTN-208ENST00000438008 STYK1Q6J9G0 422 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 ARHGAP27Q6ZUM4 889 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 PPP1R42Q7Z4L9 355 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 ZNF521Q96K83 1311 aa22.99■■□□□ 1.27
NCSTN-208ENST00000438008 NTSR2O95665 410 aa22.98■■□□□ 1.27
NCSTN-208ENST00000438008 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
NCSTN-208ENST00000438008 ZNF622Q969S3 477 aaKnown RBP eCLIP22.98■■□□□ 1.27
NCSTN-208ENST00000438008 MASTLQ96GX5 879 aa22.98■■□□□ 1.27
NCSTN-208ENST00000438008 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
NCSTN-208ENST00000438008 GOLGA2Q08379 1002 aa22.97■■□□□ 1.27
NCSTN-208ENST00000438008 ERFEQ4G0M1 354 aa22.97■■□□□ 1.27
NCSTN-208ENST00000438008 NUTM1Q86Y26 1132 aa22.97■■□□□ 1.27
NCSTN-208ENST00000438008 CNKSR1Q969H4 720 aa22.97■■□□□ 1.27
NCSTN-208ENST00000438008 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
NCSTN-208ENST00000438008 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
NCSTN-208ENST00000438008 UTP14AQ9BVJ6 771 aaKnown RBP22.96■■□□□ 1.27
NCSTN-208ENST00000438008 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
NCSTN-208ENST00000438008 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
NCSTN-208ENST00000438008 RIC1Q4ADV7 1423 aa22.96■■□□□ 1.27
NCSTN-208ENST00000438008 NPR1P16066 1061 aa22.95■■□□□ 1.26
NCSTN-208ENST00000438008 NLRP10Q86W26 655 aa22.95■■□□□ 1.26
NCSTN-208ENST00000438008 ABCC12Q96J65 1359 aa22.95■■□□□ 1.26
NCSTN-208ENST00000438008 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
NCSTN-208ENST00000438008 COL11A2P13942 1736 aaPredicted RBP22.94■■□□□ 1.26
NCSTN-208ENST00000438008 CRY2Q49AN0 593 aa22.94■■□□□ 1.26
NCSTN-208ENST00000438008 SLC10A5Q5PT55 438 aa22.94■■□□□ 1.26
NCSTN-208ENST00000438008 ISCA1Q9BUE6 129 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms