RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KRT24Q2M2I5 525 aa21.12■□□□□ 0.97
SMPD4-207ENST00000435455 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
SMPD4-207ENST00000435455 NUP98P52948 1817 aa21.12■□□□□ 0.97
SMPD4-207ENST00000435455 MAP3K15Q6ZN16 1313 aa21.11■□□□□ 0.97
SMPD4-207ENST00000435455 PDIA6Q15084 440 aa21.11■□□□□ 0.97
SMPD4-207ENST00000435455 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
SMPD4-207ENST00000435455 NECTIN2Q92692 538 aa21.1■□□□□ 0.97
SMPD4-207ENST00000435455 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMPD4-207ENST00000435455 IL16Q14005 1332 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 NPHP1O15259 732 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 HDGFL1Q5TGJ6 251 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 CNBD1Q8NA66 436 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
SMPD4-207ENST00000435455 KCNA3P22001 575 aa21.08■□□□□ 0.97
SMPD4-207ENST00000435455 HLFQ16534 295 aa21.08■□□□□ 0.97
SMPD4-207ENST00000435455 PRR5LQ6MZQ0 368 aa21.08■□□□□ 0.97
SMPD4-207ENST00000435455 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.97
SMPD4-207ENST00000435455 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
SMPD4-207ENST00000435455 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMPD4-207ENST00000435455 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
SMPD4-207ENST00000435455 ANKRD31Q8N7Z5 1873 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 ATP10DQ9P241 1426 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 ST5P78524 1137 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 PROSER3Q2NL68 480 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 NBPF5PQ86XG9 351 aaPredicted RBP21.07■□□□□ 0.96
SMPD4-207ENST00000435455 BRIP1Q9BX63 1249 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 CHMP4AQ9BY43 222 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
SMPD4-207ENST00000435455 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
SMPD4-207ENST00000435455 ANXA1P04083 346 aa21.06■□□□□ 0.96
SMPD4-207ENST00000435455 CHRNA5P30532 468 aa21.06■□□□□ 0.96
SMPD4-207ENST00000435455 ZBTB3Q9H5J0 574 aa21.06■□□□□ 0.96
SMPD4-207ENST00000435455 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
SMPD4-207ENST00000435455 PDE6BP35913 854 aa21.05■□□□□ 0.96
SMPD4-207ENST00000435455 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
SMPD4-207ENST00000435455 WDR63Q8IWG1 891 aa21.05■□□□□ 0.96
SMPD4-207ENST00000435455 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
SMPD4-207ENST00000435455 H0YIN7 160 aa21.04■□□□□ 0.96
SMPD4-207ENST00000435455 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
SMPD4-207ENST00000435455 DALRD3Q5D0E6 543 aaKnown RBP21.04■□□□□ 0.96
SMPD4-207ENST00000435455 TPTE2Q6XPS3 522 aa21.04■□□□□ 0.96
SMPD4-207ENST00000435455 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
SMPD4-207ENST00000435455 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
SMPD4-207ENST00000435455 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
SMPD4-207ENST00000435455 COPS6Q7L5N1 327 aa21.03■□□□□ 0.96
SMPD4-207ENST00000435455 TSR2Q969E8 191 aaKnown RBP21.03■□□□□ 0.96
SMPD4-207ENST00000435455 NYXQ9GZU5 481 aa21.03■□□□□ 0.96
SMPD4-207ENST00000435455 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
SMPD4-207ENST00000435455 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.96
SMPD4-207ENST00000435455 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
SMPD4-207ENST00000435455 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
SMPD4-207ENST00000435455 C8orf58Q8NAV2 365 aa21.02■□□□□ 0.96
SMPD4-207ENST00000435455 ANKRD36CQ5JPF3 1778 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 IBTKQ9P2D0 1353 aaPredicted RBP21■□□□□ 0.95
SMPD4-207ENST00000435455 FAM177BA6PVY3 158 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 GTF2E1P29083 439 aaPredicted RBP21■□□□□ 0.95
SMPD4-207ENST00000435455 PARP10Q53GL7 1025 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 HSP90AB3PQ58FF7 597 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 ZNF34Q8IZ26 560 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 TTLL6Q8N841 843 aa21■□□□□ 0.95
SMPD4-207ENST00000435455 COL11A2P13942 1736 aaPredicted RBP21■□□□□ 0.95
SMPD4-207ENST00000435455 GPTP24298 496 aa20.99■□□□□ 0.95
SMPD4-207ENST00000435455 CCDC30Q5VVM6 783 aa20.99■□□□□ 0.95
SMPD4-207ENST00000435455 UBN2Q6ZU65 1347 aa20.98■□□□□ 0.95
SMPD4-207ENST00000435455 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
SMPD4-207ENST00000435455 ARHGAP27Q6ZUM4 889 aa20.97■□□□□ 0.95
SMPD4-207ENST00000435455 PPP1R42Q7Z4L9 355 aa20.97■□□□□ 0.95
SMPD4-207ENST00000435455 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
SMPD4-207ENST00000435455 PLBD2Q8NHP8 589 aa20.97■□□□□ 0.95
SMPD4-207ENST00000435455 ZNF622Q969S3 477 aaKnown RBP eCLIP20.97■□□□□ 0.95
SMPD4-207ENST00000435455 FANCIQ9NVI1 1328 aa20.97■□□□□ 0.95
SMPD4-207ENST00000435455 SRGNP10124 158 aa20.96■□□□□ 0.95
SMPD4-207ENST00000435455 STYK1Q6J9G0 422 aa20.96■□□□□ 0.95
SMPD4-207ENST00000435455 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
SMPD4-207ENST00000435455 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
SMPD4-207ENST00000435455 TCIRG1Q13488 830 aa20.95■□□□□ 0.94
SMPD4-207ENST00000435455 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
SMPD4-207ENST00000435455 SUSD4Q5VX71 490 aa20.95■□□□□ 0.94
SMPD4-207ENST00000435455 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
SMPD4-207ENST00000435455 MYH16Q9H6N6 1097 aa20.95■□□□□ 0.94
SMPD4-207ENST00000435455 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.94
SMPD4-207ENST00000435455 NTSR2O95665 410 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 CNKSR1Q969H4 720 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 STK31Q9BXU1 1019 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 ARFGEF2Q9Y6D5 1785 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
SMPD4-207ENST00000435455 CACNA1SQ13698 1873 aa20.93■□□□□ 0.94
SMPD4-207ENST00000435455 NPR1P16066 1061 aa20.93■□□□□ 0.94
SMPD4-207ENST00000435455 ERFEQ4G0M1 354 aa20.93■□□□□ 0.94
SMPD4-207ENST00000435455 NUTM1Q86Y26 1132 aa20.93■□□□□ 0.94
SMPD4-207ENST00000435455 ZNF784Q8NCA9 323 aaPredicted RBP20.93■□□□□ 0.94
SMPD4-207ENST00000435455 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
SMPD4-207ENST00000435455 ABCC12Q96J65 1359 aa20.93■□□□□ 0.94
SMPD4-207ENST00000435455 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
SMPD4-207ENST00000435455 PHAXQ9H814 394 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms