RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 EPB41L2O43491 1005 aaKnown RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 UBE2HP62256 183 aa18.9■□□□□ 0.62
GHDC-203ENST00000428494 COL9A3Q14050 684 aaPredicted RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 DNAAF4Q8WXU2 420 aa18.9■□□□□ 0.62
GHDC-203ENST00000428494 TSC1Q92574 1164 aa18.9■□□□□ 0.62
GHDC-203ENST00000428494 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
GHDC-203ENST00000428494 GJB2P29033 226 aa18.9■□□□□ 0.62
GHDC-203ENST00000428494 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.9■□□□□ 0.62
GHDC-203ENST00000428494 NWD1Q149M9 1564 aa18.89■□□□□ 0.62
GHDC-203ENST00000428494 FAM184AQ8NB25 1140 aa18.89■□□□□ 0.61
GHDC-203ENST00000428494 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
GHDC-203ENST00000428494 DIAPH3Q9NSV4 1193 aa18.89■□□□□ 0.61
GHDC-203ENST00000428494 PXDNLA1KZ92 1463 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 UVSSAQ2YD98 709 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 NECAB1Q8N987 351 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 DYNC1I1O14576 645 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 AP5Z1O43299 807 aa18.88■□□□□ 0.61
GHDC-203ENST00000428494 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
GHDC-203ENST00000428494 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
GHDC-203ENST00000428494 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
GHDC-203ENST00000428494 ST3GAL1Q11201 340 aa18.87■□□□□ 0.61
GHDC-203ENST00000428494 NOLC1Q14978 699 aaKnown RBP eCLIP18.87■□□□□ 0.61
GHDC-203ENST00000428494 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
GHDC-203ENST00000428494 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
GHDC-203ENST00000428494 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
GHDC-203ENST00000428494 BABAM1Q9NWV8 329 aa18.86■□□□□ 0.61
GHDC-203ENST00000428494 CHMP3Q9Y3E7 222 aa18.86■□□□□ 0.61
GHDC-203ENST00000428494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.86■□□□□ 0.61
GHDC-203ENST00000428494 KDM4AO75164 1064 aa18.85■□□□□ 0.61
GHDC-203ENST00000428494 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
GHDC-203ENST00000428494 ME3Q16798 604 aa18.85■□□□□ 0.61
GHDC-203ENST00000428494 PIBF1Q8WXW3 757 aa18.85■□□□□ 0.61
GHDC-203ENST00000428494 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 FAM173BQ6P4H8 233 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 CLASRPQ8N2M8 674 aaKnown RBP18.84■□□□□ 0.61
GHDC-203ENST00000428494 ADCY9O60503 1353 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 FUCA2Q9BTY2 467 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 DIP2AQ14689 1571 aa18.84■□□□□ 0.61
GHDC-203ENST00000428494 PROSER3Q2NL68 480 aa18.83■□□□□ 0.61
GHDC-203ENST00000428494 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.61
GHDC-203ENST00000428494 FERMT3Q86UX7 667 aa18.83■□□□□ 0.61
GHDC-203ENST00000428494 FAM227BQ96M60 508 aa18.83■□□□□ 0.61
GHDC-203ENST00000428494 TCEANC2Q96MN5 208 aa18.83■□□□□ 0.61
GHDC-203ENST00000428494 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.6
GHDC-203ENST00000428494 VPS53Q5VIR6 699 aa18.83■□□□□ 0.6
GHDC-203ENST00000428494 ZSWIM6Q9HCJ5 1215 aa18.83■□□□□ 0.6
GHDC-203ENST00000428494 ATP6V1DQ9Y5K8 247 aa18.83■□□□□ 0.6
GHDC-203ENST00000428494 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.6
GHDC-203ENST00000428494 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.6
GHDC-203ENST00000428494 N4BP2Q86UW6 1770 aaPredicted RBP18.82■□□□□ 0.6
GHDC-203ENST00000428494 HSP90AB4PQ58FF6 505 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 ECHDC1Q9NTX5 307 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
GHDC-203ENST00000428494 TTC41PQ6P2S7 1318 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
GHDC-203ENST00000428494 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 IFIT2P09913 472 aaKnown RBP18.81■□□□□ 0.6
GHDC-203ENST00000428494 NECTIN1Q15223 517 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 SPC24Q8NBT2 197 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 LRRC59Q96AG4 307 aaKnown RBP18.81■□□□□ 0.6
GHDC-203ENST00000428494 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
GHDC-203ENST00000428494 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
GHDC-203ENST00000428494 AACSQ86V21 672 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 MYRIPQ8NFW9 859 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 TAF6LQ9Y6J9 622 aa18.81■□□□□ 0.6
GHDC-203ENST00000428494 KCNA6P17658 529 aa18.8■□□□□ 0.6
GHDC-203ENST00000428494 TEFQ10587 303 aa18.8■□□□□ 0.6
GHDC-203ENST00000428494 CAMK4Q16566 473 aa18.8■□□□□ 0.6
GHDC-203ENST00000428494 CCDC8Q9H0W5 538 aaPredicted RBP18.8■□□□□ 0.6
GHDC-203ENST00000428494 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
GHDC-203ENST00000428494 KCNJ4P48050 445 aa18.8■□□□□ 0.6
GHDC-203ENST00000428494 LARP1BQ659C4 914 aaKnown RBP18.79■□□□□ 0.6
GHDC-203ENST00000428494 CREB3L3Q68CJ9 461 aa18.79■□□□□ 0.6
GHDC-203ENST00000428494 CCDC171Q6TFL3 1326 aa18.79■□□□□ 0.6
GHDC-203ENST00000428494 FGD1P98174 961 aa18.79■□□□□ 0.6
GHDC-203ENST00000428494 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
GHDC-203ENST00000428494 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
GHDC-203ENST00000428494 CDC37L1Q7L3B6 337 aa18.78■□□□□ 0.6
GHDC-203ENST00000428494 KCNF1Q9H3M0 494 aa18.78■□□□□ 0.6
GHDC-203ENST00000428494 TLR7Q9NYK1 1049 aaKnown RBP18.78■□□□□ 0.6
GHDC-203ENST00000428494 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
GHDC-203ENST00000428494 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
GHDC-203ENST00000428494 PYCARDQ9ULZ3 195 aa18.78■□□□□ 0.6
GHDC-203ENST00000428494 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
GHDC-203ENST00000428494 SASH1O94885 1247 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.6
GHDC-203ENST00000428494 LIG1P18858 919 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 MTX1Q13505 466 aa18.77■□□□□ 0.6
GHDC-203ENST00000428494 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
GHDC-203ENST00000428494 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms