RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
RCC1-207ENST00000427469 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
RCC1-207ENST00000427469 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
RCC1-207ENST00000427469 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
RCC1-207ENST00000427469 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
RCC1-207ENST00000427469 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 PRELPP51888 382 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 HLFQ16534 295 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 GPBP1L1Q9HC44 474 aaPredicted RBP17.22■□□□□ 0.35
RCC1-207ENST00000427469 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
RCC1-207ENST00000427469 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
RCC1-207ENST00000427469 KIF3CO14782 793 aa17.21■□□□□ 0.35
RCC1-207ENST00000427469 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
RCC1-207ENST00000427469 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
RCC1-207ENST00000427469 PDIA6Q15084 440 aa17.21■□□□□ 0.35
RCC1-207ENST00000427469 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
RCC1-207ENST00000427469 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
RCC1-207ENST00000427469 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
RCC1-207ENST00000427469 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
RCC1-207ENST00000427469 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
RCC1-207ENST00000427469 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 H0YIN7 160 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 CHL1O00533 1208 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 PDE6BP35913 854 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 RASSF7Q02833 373 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
RCC1-207ENST00000427469 DDX60Q8IY21 1712 aaKnown RBP17.2■□□□□ 0.34
RCC1-207ENST00000427469 WDR90Q96KV7 1748 aa17.19■□□□□ 0.34
RCC1-207ENST00000427469 NFKBIEO00221 500 aa17.19■□□□□ 0.34
RCC1-207ENST00000427469 SRGNP10124 158 aa17.19■□□□□ 0.34
RCC1-207ENST00000427469 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
RCC1-207ENST00000427469 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
RCC1-207ENST00000427469 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
RCC1-207ENST00000427469 ST5P78524 1137 aa17.18■□□□□ 0.34
RCC1-207ENST00000427469 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
RCC1-207ENST00000427469 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
RCC1-207ENST00000427469 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
RCC1-207ENST00000427469 TAF1P21675 1872 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 STYK1Q6J9G0 422 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
RCC1-207ENST00000427469 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
RCC1-207ENST00000427469 MYL6BP14649 208 aa17.16■□□□□ 0.34
RCC1-207ENST00000427469 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
RCC1-207ENST00000427469 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
RCC1-207ENST00000427469 LTBP3Q9NS15 1303 aa17.15■□□□□ 0.34
RCC1-207ENST00000427469 LMNB1P20700 586 aa17.14■□□□□ 0.33
RCC1-207ENST00000427469 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
RCC1-207ENST00000427469 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
RCC1-207ENST00000427469 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
RCC1-207ENST00000427469 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
RCC1-207ENST00000427469 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
RCC1-207ENST00000427469 MASTLQ96GX5 879 aa17.14■□□□□ 0.33
RCC1-207ENST00000427469 NMRK2Q9NPI5 230 aa17.14■□□□□ 0.33
RCC1-207ENST00000427469 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 ANXA1P04083 346 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 HOXB7P09629 217 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 CRY2Q49AN0 593 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 NGEFQ8N5V2 710 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 ZBTB3Q9H5J0 574 aa17.13■□□□□ 0.33
RCC1-207ENST00000427469 APAF1O14727 1248 aa17.12■□□□□ 0.33
RCC1-207ENST00000427469 C21orf2O43822 256 aa17.12■□□□□ 0.33
RCC1-207ENST00000427469 NTSR2O95665 410 aa17.12■□□□□ 0.33
RCC1-207ENST00000427469 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
RCC1-207ENST00000427469 SCN4AP35499 1836 aa17.12■□□□□ 0.33
RCC1-207ENST00000427469 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
RCC1-207ENST00000427469 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
RCC1-207ENST00000427469 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 NPHP1O15259 732 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 NPR1P16066 1061 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 SUSD4Q5VX71 490 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
RCC1-207ENST00000427469 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
RCC1-207ENST00000427469 MYH3P11055 1940 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 PCNTO95613 3336 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
RCC1-207ENST00000427469 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 GPTP24298 496 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 COL4A5P29400 1685 aa17.09■□□□□ 0.33
RCC1-207ENST00000427469 COL4A1P02462 1669 aa17.08■□□□□ 0.32
RCC1-207ENST00000427469 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
RCC1-207ENST00000427469 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
RCC1-207ENST00000427469 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
RCC1-207ENST00000427469 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
RCC1-207ENST00000427469 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
RCC1-207ENST00000427469 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
RCC1-207ENST00000427469 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
RCC1-207ENST00000427469 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms