RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 MAP3K15Q6ZN16 1313 aa22.39■■□□□ 1.17
LMCD1-204ENST00000426878 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.17
LMCD1-204ENST00000426878 KCNA3P22001 575 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 KIF6Q6ZMV9 814 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 TTLL7Q6ZT98 887 aa22.38■■□□□ 1.17
LMCD1-204ENST00000426878 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
LMCD1-204ENST00000426878 HLFQ16534 295 aa22.37■■□□□ 1.17
LMCD1-204ENST00000426878 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 CHD4Q14839 1912 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 PROSER3Q2NL68 480 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 PRR5LQ6MZQ0 368 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
LMCD1-204ENST00000426878 BRCA1P38398 1863 aaKnown RBP22.35■■□□□ 1.17
LMCD1-204ENST00000426878 SENP3-EIF4A1A0A087X0R7 540 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 BRIP1Q9BX63 1249 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
LMCD1-204ENST00000426878 NUP98P52948 1817 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 ATP10DQ9P241 1426 aa22.34■■□□□ 1.17
LMCD1-204ENST00000426878 CNBD1Q8NA66 436 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 CHMP4AQ9BY43 222 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 PIM2Q9P1W9 311 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 PDZRN3Q9UPQ7 1066 aa22.33■■□□□ 1.17
LMCD1-204ENST00000426878 ANXA1P04083 346 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 YY1P25490 414 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
LMCD1-204ENST00000426878 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
LMCD1-204ENST00000426878 CHRNA5P30532 468 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 PDE6BP35913 854 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ST5P78524 1137 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 XAGE3Q8WTP9 111 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 WWC3Q9ULE0 1092 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 BCS1LQ9Y276 419 aa22.31■■□□□ 1.16
LMCD1-204ENST00000426878 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
LMCD1-204ENST00000426878 ZNF34Q8IZ26 560 aa22.3■■□□□ 1.16
LMCD1-204ENST00000426878 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
LMCD1-204ENST00000426878 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
LMCD1-204ENST00000426878 H0YIN7 160 aa22.29■■□□□ 1.16
LMCD1-204ENST00000426878 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
LMCD1-204ENST00000426878 DALRD3Q5D0E6 543 aaKnown RBP22.29■■□□□ 1.16
LMCD1-204ENST00000426878 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 NPHP1O15259 732 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 ARFGEF1Q9Y6D6 1849 aa22.28■■□□□ 1.16
LMCD1-204ENST00000426878 IBTKQ9P2D0 1353 aaPredicted RBP22.28■■□□□ 1.16
LMCD1-204ENST00000426878 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
LMCD1-204ENST00000426878 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
LMCD1-204ENST00000426878 NYXQ9GZU5 481 aa22.27■■□□□ 1.16
LMCD1-204ENST00000426878 KLRG2A4D1S0 409 aaPredicted RBP22.26■■□□□ 1.15
LMCD1-204ENST00000426878 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 UBN2Q6ZU65 1347 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 ZNF521Q96K83 1311 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
LMCD1-204ENST00000426878 PARP10Q53GL7 1025 aa22.25■■□□□ 1.15
LMCD1-204ENST00000426878 GPTP24298 496 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 ANKRD13DQ6ZTN6 518 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 PLBD2Q8NHP8 589 aa22.24■■□□□ 1.15
LMCD1-204ENST00000426878 TWISTNBQ3B726 338 aaPredicted RBP22.23■■□□□ 1.15
LMCD1-204ENST00000426878 TTLL6Q8N841 843 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 SRGNP10124 158 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 TCIRG1Q13488 830 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 SUSD4Q5VX71 490 aa22.23■■□□□ 1.15
LMCD1-204ENST00000426878 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
LMCD1-204ENST00000426878 GOLGA2Q08379 1002 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 STYK1Q6J9G0 422 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
LMCD1-204ENST00000426878 RIC1Q4ADV7 1423 aa22.22■■□□□ 1.15
LMCD1-204ENST00000426878 COL11A2P13942 1736 aaPredicted RBP22.21■■□□□ 1.15
LMCD1-204ENST00000426878 NTSR2O95665 410 aa22.21■■□□□ 1.15
LMCD1-204ENST00000426878 MASTLQ96GX5 879 aa22.21■■□□□ 1.15
LMCD1-204ENST00000426878 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.15
LMCD1-204ENST00000426878 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
LMCD1-204ENST00000426878 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
LMCD1-204ENST00000426878 ZNF622Q969S3 477 aaKnown RBP eCLIP22.2■■□□□ 1.14
LMCD1-204ENST00000426878 ERFEQ4G0M1 354 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 NUTM1Q86Y26 1132 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 CNKSR1Q969H4 720 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 PHAXQ9H814 394 aaKnown RBP22.19■■□□□ 1.14
LMCD1-204ENST00000426878 ABCC12Q96J65 1359 aa22.19■■□□□ 1.14
LMCD1-204ENST00000426878 NPR1P16066 1061 aa22.18■■□□□ 1.14
LMCD1-204ENST00000426878 CRY2Q49AN0 593 aa22.18■■□□□ 1.14
LMCD1-204ENST00000426878 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
LMCD1-204ENST00000426878 VAMP4O75379 141 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms