RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NUP98P52948 1817 aa24.25■■□□□ 1.47
PRNP-202ENST00000424424 ERVV-1B6SEH8 477 aa24.24■■□□□ 1.47
PRNP-202ENST00000424424 DPEP1P16444 411 aa24.24■■□□□ 1.47
PRNP-202ENST00000424424 YBX3P16989 372 aaKnown RBP eCLIP24.24■■□□□ 1.472e-6■□□□□ 8.5
PRNP-202ENST00000424424 HDGFL1Q5TGJ6 251 aa24.24■■□□□ 1.47
PRNP-202ENST00000424424 DUSP27Q5VZP5 1158 aa24.23■■□□□ 1.47
PRNP-202ENST00000424424 SALL2Q9Y467 1007 aaPredicted RBP24.23■■□□□ 1.47
PRNP-202ENST00000424424 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
PRNP-202ENST00000424424 PDIA6Q15084 440 aa24.22■■□□□ 1.47
PRNP-202ENST00000424424 TTLL7Q6ZT98 887 aa24.22■■□□□ 1.47
PRNP-202ENST00000424424 WWC3Q9ULE0 1092 aa24.22■■□□□ 1.47
PRNP-202ENST00000424424 NIP7Q9Y221 180 aaKnown RBP eCLIP24.22■■□□□ 1.47
PRNP-202ENST00000424424 BRCA1P38398 1863 aaKnown RBP24.21■■□□□ 1.47
PRNP-202ENST00000424424 IL16Q14005 1332 aa24.21■■□□□ 1.47
PRNP-202ENST00000424424 HLFQ16534 295 aa24.21■■□□□ 1.47
PRNP-202ENST00000424424 CHMP4AQ9BY43 222 aa24.21■■□□□ 1.47
PRNP-202ENST00000424424 DDX21Q9NR30 783 aaKnown RBP eCLIP24.21■■□□□ 1.47
PRNP-202ENST00000424424 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
PRNP-202ENST00000424424 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
PRNP-202ENST00000424424 ZBTB3Q9H5J0 574 aa24.2■■□□□ 1.46
PRNP-202ENST00000424424 PIM2Q9P1W9 311 aa24.2■■□□□ 1.46
PRNP-202ENST00000424424 ANXA1P04083 346 aa24.19■■□□□ 1.46
PRNP-202ENST00000424424 ST5P78524 1137 aa24.19■■□□□ 1.46
PRNP-202ENST00000424424 PRR5LQ6MZQ0 368 aa24.19■■□□□ 1.46
PRNP-202ENST00000424424 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
PRNP-202ENST00000424424 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
PRNP-202ENST00000424424 DBF4Q9UBU7 674 aaPredicted RBP24.19■■□□□ 1.46
PRNP-202ENST00000424424 BCS1LQ9Y276 419 aa24.19■■□□□ 1.46
PRNP-202ENST00000424424 PDE6BP35913 854 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 PROSER3Q2NL68 480 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 TPTE2Q6XPS3 522 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 LRP10Q7Z4F1 713 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 CHPF2Q9P2E5 772 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 PDZRN3Q9UPQ7 1066 aa24.18■■□□□ 1.46
PRNP-202ENST00000424424 H0YIN7 160 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
PRNP-202ENST00000424424 KCNA3P22001 575 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 CHRNA5P30532 468 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 COPS6Q7L5N1 327 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 BRIP1Q9BX63 1249 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 ANKRD31Q8N7Z5 1873 aa24.17■■□□□ 1.46
PRNP-202ENST00000424424 AIMP1Q12904 312 aaKnown RBP24.16■■□□□ 1.46
PRNP-202ENST00000424424 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
PRNP-202ENST00000424424 GIGYF2Q6Y7W6 1299 aaKnown RBP24.16■■□□□ 1.46
PRNP-202ENST00000424424 ZNF784Q8NCA9 323 aaPredicted RBP24.16■■□□□ 1.46
PRNP-202ENST00000424424 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
PRNP-202ENST00000424424 DLEC1Q9Y238 1755 aa24.16■■□□□ 1.46
PRNP-202ENST00000424424 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
PRNP-202ENST00000424424 DALRD3Q5D0E6 543 aaKnown RBP24.15■■□□□ 1.46
PRNP-202ENST00000424424 C2CD5Q86YS7 1000 aa24.15■■□□□ 1.46
PRNP-202ENST00000424424 C8orf58Q8NAV2 365 aa24.15■■□□□ 1.46
PRNP-202ENST00000424424 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
PRNP-202ENST00000424424 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
PRNP-202ENST00000424424 GTF2E1P29083 439 aaPredicted RBP24.14■■□□□ 1.45
PRNP-202ENST00000424424 CCDC24Q8N4L8 307 aa24.14■■□□□ 1.45
PRNP-202ENST00000424424 NYXQ9GZU5 481 aa24.14■■□□□ 1.45
PRNP-202ENST00000424424 ATP10DQ9P241 1426 aa24.14■■□□□ 1.45
PRNP-202ENST00000424424 FAM177BA6PVY3 158 aa24.13■■□□□ 1.45
PRNP-202ENST00000424424 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
PRNP-202ENST00000424424 ANKRD36CQ5JPF3 1778 aa24.12■■□□□ 1.45
PRNP-202ENST00000424424 CCDC30Q5VVM6 783 aa24.12■■□□□ 1.45
PRNP-202ENST00000424424 GPTP24298 496 aa24.11■■□□□ 1.45
PRNP-202ENST00000424424 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
PRNP-202ENST00000424424 PARP10Q53GL7 1025 aa24.1■■□□□ 1.45
PRNP-202ENST00000424424 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
PRNP-202ENST00000424424 GOLGA2Q08379 1002 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 TWISTNBQ3B726 338 aaPredicted RBP24.09■■□□□ 1.45
PRNP-202ENST00000424424 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 TSPYL6Q8N831 410 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 TTLL6Q8N841 843 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 ZNF622Q969S3 477 aaKnown RBP eCLIP24.09■■□□□ 1.45
PRNP-202ENST00000424424 MYH16Q9H6N6 1097 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
PRNP-202ENST00000424424 IBTKQ9P2D0 1353 aaPredicted RBP24.08■■□□□ 1.45
PRNP-202ENST00000424424 ARHGAP27Q6ZUM4 889 aa24.08■■□□□ 1.45
PRNP-202ENST00000424424 PLBD2Q8NHP8 589 aa24.08■■□□□ 1.45
PRNP-202ENST00000424424 UBN2Q6ZU65 1347 aa24.08■■□□□ 1.44
PRNP-202ENST00000424424 STK31Q9BXU1 1019 aa24.07■■□□□ 1.44
PRNP-202ENST00000424424 COL11A2P13942 1736 aaPredicted RBP24.07■■□□□ 1.44
PRNP-202ENST00000424424 TCIRG1Q13488 830 aa24.06■■□□□ 1.44
PRNP-202ENST00000424424 SUSD4Q5VX71 490 aa24.06■■□□□ 1.44
PRNP-202ENST00000424424 CACNA1SQ13698 1873 aa24.05■■□□□ 1.44
PRNP-202ENST00000424424 CNKSR1Q969H4 720 aa24.05■■□□□ 1.44
PRNP-202ENST00000424424 MASTLQ96GX5 879 aa24.05■■□□□ 1.44
PRNP-202ENST00000424424 CACNA1FO60840 1977 aa24.05■■□□□ 1.44
PRNP-202ENST00000424424 GOLGB1Q14789 3259 aaKnown RBP24.04■■□□□ 1.44
PRNP-202ENST00000424424 SRGNP10124 158 aa24.04■■□□□ 1.44
PRNP-202ENST00000424424 STYK1Q6J9G0 422 aa24.04■■□□□ 1.44
PRNP-202ENST00000424424 RIC3Q7Z5B4 369 aa24.04■■□□□ 1.44
PRNP-202ENST00000424424 NUTM1Q86Y26 1132 aa24.04■■□□□ 1.44
PRNP-202ENST00000424424 UTP14AQ9BVJ6 771 aaKnown RBP24.04■■□□□ 1.44
PRNP-202ENST00000424424 ARFGEF2Q9Y6D5 1785 aa24.03■■□□□ 1.44
PRNP-202ENST00000424424 DDX58O95786 925 aaKnown RBP24.03■■□□□ 1.44
PRNP-202ENST00000424424 ERFEQ4G0M1 354 aa24.03■■□□□ 1.44
PRNP-202ENST00000424424 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
PRNP-202ENST00000424424 NTSR2O95665 410 aa24.02■■□□□ 1.44
PRNP-202ENST00000424424 NPR1P16066 1061 aa24.02■■□□□ 1.44
PRNP-202ENST00000424424 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
PRNP-202ENST00000424424 MIER1Q8N108 512 aa24.02■■□□□ 1.44
PRNP-202ENST00000424424 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms