RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 ADH1CP00326 375 aa9.77□□□□□ -0.85
EPHA4-205ENST00000419964 NR5A1Q13285 461 aa9.77□□□□□ -0.85
EPHA4-205ENST00000419964 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-205ENST00000419964 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
EPHA4-205ENST00000419964 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
EPHA4-205ENST00000419964 PKD2L1Q9P0L9 805 aa9.77□□□□□ -0.85
EPHA4-205ENST00000419964 PPLO60437 1756 aa9.77□□□□□ -0.85
EPHA4-205ENST00000419964 FSHRP23945 695 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 GRM5P41594 1212 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 RAB15P59190 212 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
EPHA4-205ENST00000419964 EML3Q32P44 896 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 INTS6LQ5JSJ4 861 aaKnown RBP9.76□□□□□ -0.85
EPHA4-205ENST00000419964 DEPDC4Q8N2C3 294 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 SNIP1Q8TAD8 396 aaKnown RBP9.76□□□□□ -0.85
EPHA4-205ENST00000419964 TESK2Q96S53 571 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 MROH2AA6NES4 1674 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 PREX1Q8TCU6 1659 aa9.76□□□□□ -0.85
EPHA4-205ENST00000419964 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 PIK3C2GO75747 1445 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-205ENST00000419964 ALDH1A1P00352 501 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 NCOA4Q13772 614 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 SYNMO15061 1565 aa9.75□□□□□ -0.85
EPHA4-205ENST00000419964 MYO3AQ8NEV4 1616 aa9.74□□□□□ -0.85
EPHA4-205ENST00000419964 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
EPHA4-205ENST00000419964 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
EPHA4-205ENST00000419964 MRS2Q9HD23 443 aa9.74□□□□□ -0.85
EPHA4-205ENST00000419964 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-205ENST00000419964 ERVK-7P63135 1459 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 TTC24A2A3L6 582 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-205ENST00000419964 ATP5J2-PTCD1G3V325 749 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 ERVH48-1M5A8F1 160 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 GDF9O60383 454 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 USP4Q13107 963 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 OXLD1Q5BKU9 147 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 CCDC116Q8IYX3 515 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 CYP4X1Q8N118 509 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
EPHA4-205ENST00000419964 C14orf93Q9H972 538 aaKnown RBP9.73□□□□□ -0.85
EPHA4-205ENST00000419964 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
EPHA4-205ENST00000419964 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 WASF2Q9Y6W5 498 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 MYBBP1AQ9BQG0 1328 aaKnown RBP9.73□□□□□ -0.85
EPHA4-205ENST00000419964 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
EPHA4-205ENST00000419964 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
EPHA4-205ENST00000419964 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
EPHA4-205ENST00000419964 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
EPHA4-205ENST00000419964 SPATA31D1Q6ZQQ2 1576 aa9.71□□□□□ -0.85
EPHA4-205ENST00000419964 MYCP01106 439 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-205ENST00000419964 PRR20EP86478 221 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 PRR20CP86479 221 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 PRR20DP86480 221 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 PRR20BP86481 221 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 PRR20AP86496 221 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 TMC1Q8TDI8 760 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-205ENST00000419964 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 DISP3Q9P2K9 1392 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 TMEM131LA2VDJ0 1609 aa9.71□□□□□ -0.86
EPHA4-205ENST00000419964 TNFRSF10AO00220 468 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 ATG7O95352 703 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 IDI1Q13907 227 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
EPHA4-205ENST00000419964 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 CENPJQ9HC77 1338 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-205ENST00000419964 INSRP06213 1382 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
EPHA4-205ENST00000419964 CLTCQ00610 1675 aaKnown RBP9.7□□□□□ -0.86
EPHA4-205ENST00000419964 ADGRB1O14514 1584 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 RASA1P20936 1047 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 HNRNPUQ00839 825 aaKnown RBP eCLIP9.69□□□□□ -0.86
EPHA4-205ENST00000419964 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-205ENST00000419964 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.69□□□□□ -0.86
EPHA4-205ENST00000419964 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
EPHA4-205ENST00000419964 NEFLP07196 543 aa9.68□□□□□ -0.86
EPHA4-205ENST00000419964 NNTQ13423 1086 aa9.68□□□□□ -0.86
EPHA4-205ENST00000419964 NINLQ9Y2I6 1382 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 ZBED9Q6R2W3 1325 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 NR3C2P08235 984 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 MYT1Q01538 1121 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 PDE4CQ08493 712 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 CC2D2BQ6DHV5 1058 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 OGFOD1Q8N543 542 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 PANK3Q9H999 370 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 TMPRSS4Q9NRS4 437 aa9.67□□□□□ -0.86
EPHA4-205ENST00000419964 J3QL48 77 aa9.66□□□□□ -0.86
EPHA4-205ENST00000419964 GTF2IP78347 998 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms