RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 LRP10Q7Z4F1 713 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 MBIPQ9NS73 344 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 IFT57Q9NWB7 429 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 PIM2Q9P1W9 311 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 BCS1LQ9Y276 419 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 NUP98P52948 1817 aa26.49■■□□□ 1.83
GTF3A-202ENST00000419181 HLFQ16534 295 aa26.48■■□□□ 1.83
GTF3A-202ENST00000419181 MAP3K15Q6ZN16 1313 aa26.47■■□□□ 1.83
GTF3A-202ENST00000419181 ERVV-1B6SEH8 477 aa26.47■■□□□ 1.83
GTF3A-202ENST00000419181 TTLL7Q6ZT98 887 aa26.47■■□□□ 1.83
GTF3A-202ENST00000419181 HOXB7P09629 217 aa26.46■■□□□ 1.83
GTF3A-202ENST00000419181 GNAI1P63096 354 aa26.46■■□□□ 1.83
GTF3A-202ENST00000419181 CCDC27Q2M243 656 aa26.46■■□□□ 1.83
GTF3A-202ENST00000419181 KIF6Q6ZMV9 814 aa26.46■■□□□ 1.83
GTF3A-202ENST00000419181 CNBD1Q8NA66 436 aa26.46■■□□□ 1.83
GTF3A-202ENST00000419181 PROSER3Q2NL68 480 aa26.45■■□□□ 1.82
GTF3A-202ENST00000419181 NIP7Q9Y221 180 aaKnown RBP eCLIP26.45■■□□□ 1.82
GTF3A-202ENST00000419181 DALRD3Q5D0E6 543 aaKnown RBP26.44■■□□□ 1.82
GTF3A-202ENST00000419181 BRIP1Q9BX63 1249 aa26.44■■□□□ 1.82
GTF3A-202ENST00000419181 ATP10DQ9P241 1426 aa26.44■■□□□ 1.82
GTF3A-202ENST00000419181 COL11A2P13942 1736 aaPredicted RBP26.44■■□□□ 1.82
GTF3A-202ENST00000419181 NCBP3Q53F19 620 aaKnown RBP26.43■■□□□ 1.82
GTF3A-202ENST00000419181 CCDC24Q8N4L8 307 aa26.43■■□□□ 1.82
GTF3A-202ENST00000419181 NECTIN2Q92692 538 aa26.43■■□□□ 1.82
GTF3A-202ENST00000419181 SENP3-EIF4A1A0A087X0R7 540 aa26.42■■□□□ 1.82
GTF3A-202ENST00000419181 ANXA1P04083 346 aa26.42■■□□□ 1.82
GTF3A-202ENST00000419181 NBPF5PQ86XG9 351 aaPredicted RBP26.42■■□□□ 1.82
GTF3A-202ENST00000419181 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
GTF3A-202ENST00000419181 ZBTB3Q9H5J0 574 aa26.42■■□□□ 1.82
GTF3A-202ENST00000419181 PDE6BP35913 854 aa26.41■■□□□ 1.82
GTF3A-202ENST00000419181 ST5P78524 1137 aa26.41■■□□□ 1.82
GTF3A-202ENST00000419181 DUSP27Q5VZP5 1158 aa26.41■■□□□ 1.82
GTF3A-202ENST00000419181 WWC1Q8IX03 1113 aa26.41■■□□□ 1.82
GTF3A-202ENST00000419181 DDX21Q9NR30 783 aaKnown RBP eCLIP26.41■■□□□ 1.82
GTF3A-202ENST00000419181 H0YIN7 160 aa26.4■■□□□ 1.82
GTF3A-202ENST00000419181 NPHP1O15259 732 aa26.4■■□□□ 1.82
GTF3A-202ENST00000419181 HDGFL1Q5TGJ6 251 aa26.4■■□□□ 1.82
GTF3A-202ENST00000419181 PDZRN3Q9UPQ7 1066 aa26.4■■□□□ 1.82
GTF3A-202ENST00000419181 GIGYF2Q6Y7W6 1299 aaKnown RBP26.39■■□□□ 1.82
GTF3A-202ENST00000419181 TPTE2Q6XPS3 522 aa26.38■■□□□ 1.81
GTF3A-202ENST00000419181 CHPF2Q9P2E5 772 aa26.38■■□□□ 1.81
GTF3A-202ENST00000419181 ADCY9O60503 1353 aa26.37■■□□□ 1.81
GTF3A-202ENST00000419181 FAM9BQ8IZU0 186 aa26.37■■□□□ 1.81
GTF3A-202ENST00000419181 ARHGAP27Q6ZUM4 889 aa26.36■■□□□ 1.81
GTF3A-202ENST00000419181 COPS6Q7L5N1 327 aa26.36■■□□□ 1.81
GTF3A-202ENST00000419181 TTLL6Q8N841 843 aa26.36■■□□□ 1.81
GTF3A-202ENST00000419181 XAGE3Q8WTP9 111 aa26.36■■□□□ 1.81
GTF3A-202ENST00000419181 UBN2Q6ZU65 1347 aa26.36■■□□□ 1.81
GTF3A-202ENST00000419181 ANKRD36CQ5JPF3 1778 aa26.35■■□□□ 1.81
GTF3A-202ENST00000419181 IBTKQ9P2D0 1353 aaPredicted RBP26.35■■□□□ 1.81
GTF3A-202ENST00000419181 ZNF34Q8IZ26 560 aa26.35■■□□□ 1.81
GTF3A-202ENST00000419181 DBF4Q9UBU7 674 aaPredicted RBP26.35■■□□□ 1.81
GTF3A-202ENST00000419181 IL16Q14005 1332 aa26.35■■□□□ 1.81
GTF3A-202ENST00000419181 FAM177BA6PVY3 158 aa26.34■■□□□ 1.81
GTF3A-202ENST00000419181 GPTP24298 496 aa26.34■■□□□ 1.81
GTF3A-202ENST00000419181 C8orf58Q8NAV2 365 aa26.34■■□□□ 1.81
GTF3A-202ENST00000419181 SRGNP10124 158 aa26.33■■□□□ 1.81
GTF3A-202ENST00000419181 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
GTF3A-202ENST00000419181 NYXQ9GZU5 481 aa26.33■■□□□ 1.81
GTF3A-202ENST00000419181 ARFGEF2Q9Y6D5 1785 aa26.33■■□□□ 1.8
GTF3A-202ENST00000419181 TNRC6CQ9HCJ0 1690 aaKnown RBP26.32■■□□□ 1.8
GTF3A-202ENST00000419181 KLRG2A4D1S0 409 aaPredicted RBP26.32■■□□□ 1.8
GTF3A-202ENST00000419181 ELL2O00472 640 aaPredicted RBP26.32■■□□□ 1.8
GTF3A-202ENST00000419181 TSR2Q969E8 191 aaKnown RBP26.32■■□□□ 1.8
GTF3A-202ENST00000419181 ZNF622Q969S3 477 aaKnown RBP eCLIP26.32■■□□□ 1.8
GTF3A-202ENST00000419181 STYK1Q6J9G0 422 aa26.31■■□□□ 1.8
GTF3A-202ENST00000419181 HYPKQ9NX55 129 aa26.31■■□□□ 1.8
GTF3A-202ENST00000419181 ABCC12Q96J65 1359 aa26.31■■□□□ 1.8
GTF3A-202ENST00000419181 CACNA1SQ13698 1873 aa26.3■■□□□ 1.8
GTF3A-202ENST00000419181 GTF2E1P29083 439 aaPredicted RBP26.3■■□□□ 1.8
GTF3A-202ENST00000419181 SUSD4Q5VX71 490 aa26.3■■□□□ 1.8
GTF3A-202ENST00000419181 RIC1Q4ADV7 1423 aa26.3■■□□□ 1.8
GTF3A-202ENST00000419181 PARP10Q53GL7 1025 aa26.29■■□□□ 1.8
GTF3A-202ENST00000419181 NUTM1Q86Y26 1132 aa26.29■■□□□ 1.8
GTF3A-202ENST00000419181 MASTLQ96GX5 879 aa26.29■■□□□ 1.8
GTF3A-202ENST00000419181 SALL2Q9Y467 1007 aaPredicted RBP26.29■■□□□ 1.8
GTF3A-202ENST00000419181 SBF1O95248 1867 aa26.29■■□□□ 1.8
GTF3A-202ENST00000419181 SLX4Q8IY92 1834 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 NTSR2O95665 410 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 HSP90AB3PQ58FF7 597 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 WDR63Q8IWG1 891 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 TSPYL6Q8N831 410 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 ZNF526Q8TF50 670 aaPredicted RBP26.28■■□□□ 1.8
GTF3A-202ENST00000419181 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
GTF3A-202ENST00000419181 ERFEQ4G0M1 354 aa26.27■■□□□ 1.8
GTF3A-202ENST00000419181 PLBD2Q8NHP8 589 aa26.27■■□□□ 1.8
GTF3A-202ENST00000419181 GPBP1L1Q9HC44 474 aaPredicted RBP26.27■■□□□ 1.8
GTF3A-202ENST00000419181 NPR1P16066 1061 aa26.26■■□□□ 1.79
GTF3A-202ENST00000419181 PPP1R42Q7Z4L9 355 aa26.26■■□□□ 1.79
GTF3A-202ENST00000419181 TCIRG1Q13488 830 aa26.25■■□□□ 1.79
GTF3A-202ENST00000419181 PRPF40BQ6NWY9 871 aaKnown RBP26.25■■□□□ 1.79
GTF3A-202ENST00000419181 ANKRD13DQ6ZTN6 518 aa26.25■■□□□ 1.79
GTF3A-202ENST00000419181 CHMP4AQ9BY43 222 aa26.25■■□□□ 1.79
GTF3A-202ENST00000419181 FER1L6Q2WGJ9 1857 aa26.24■■□□□ 1.79
GTF3A-202ENST00000419181 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
GTF3A-202ENST00000419181 CRY2Q49AN0 593 aa26.24■■□□□ 1.79
GTF3A-202ENST00000419181 CCDC30Q5VVM6 783 aa26.24■■□□□ 1.79
GTF3A-202ENST00000419181 C1QTNF8P60827 252 aa26.23■■□□□ 1.79
GTF3A-202ENST00000419181 C9orf131Q5VYM1 1079 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms