RNA–Protein interactions for RNA: ENST00000414009.1

HPS1-205, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-205ENST00000414009 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
HPS1-205ENST00000414009 TSR2Q969E8 191 aaKnown RBP19.05■□□□□ 0.64
HPS1-205ENST00000414009 PPP1R1BQ9UD71 204 aaPredicted RBP19.05■□□□□ 0.64
HPS1-205ENST00000414009 ERBB4Q15303 1308 aa19.04■□□□□ 0.64
HPS1-205ENST00000414009 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
HPS1-205ENST00000414009 PIP4K2AP48426 406 aaPredicted RBP19.03■□□□□ 0.64
HPS1-205ENST00000414009 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
HPS1-205ENST00000414009 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
HPS1-205ENST00000414009 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
HPS1-205ENST00000414009 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
HPS1-205ENST00000414009 NLGN1Q8N2Q7 840 aa19.03■□□□□ 0.64
HPS1-205ENST00000414009 NECTIN2Q92692 538 aa19.03■□□□□ 0.64
HPS1-205ENST00000414009 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
HPS1-205ENST00000414009 USP42Q9H9J4 1324 aaKnown RBP19.01■□□□□ 0.63
HPS1-205ENST00000414009 FANCIQ9NVI1 1328 aa19.01■□□□□ 0.63
HPS1-205ENST00000414009 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
HPS1-205ENST00000414009 E9PSI1 815 aa19.01■□□□□ 0.63
HPS1-205ENST00000414009 GALR2O43603 387 aaPredicted RBP19.01■□□□□ 0.63
HPS1-205ENST00000414009 MYL6BP14649 208 aa19.01■□□□□ 0.63
HPS1-205ENST00000414009 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
HPS1-205ENST00000414009 NARFQ9UHQ1 456 aa19.01■□□□□ 0.63
HPS1-205ENST00000414009 ZNF521Q96K83 1311 aa19■□□□□ 0.63
HPS1-205ENST00000414009 NBPF26B4DH59 902 aa19■□□□□ 0.63
HPS1-205ENST00000414009 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
HPS1-205ENST00000414009 NBPF15Q8N660 670 aa19■□□□□ 0.63
HPS1-205ENST00000414009 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
HPS1-205ENST00000414009 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
HPS1-205ENST00000414009 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
HPS1-205ENST00000414009 LRP5O75197 1615 aa19■□□□□ 0.63
HPS1-205ENST00000414009 GYS1P13807 737 aa18.99■□□□□ 0.63
HPS1-205ENST00000414009 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
HPS1-205ENST00000414009 USPL1Q5W0Q7 1092 aa18.99■□□□□ 0.63
HPS1-205ENST00000414009 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
HPS1-205ENST00000414009 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
HPS1-205ENST00000414009 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
HPS1-205ENST00000414009 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
HPS1-205ENST00000414009 ZNF652Q9Y2D9 606 aa18.98■□□□□ 0.63
HPS1-205ENST00000414009 EXOSC9Q06265 439 aaKnown RBP18.97■□□□□ 0.63
HPS1-205ENST00000414009 STK31Q9BXU1 1019 aa18.97■□□□□ 0.63
HPS1-205ENST00000414009 PTGER2P43116 358 aa18.96■□□□□ 0.63
HPS1-205ENST00000414009 HYPKQ9NX55 129 aa18.96■□□□□ 0.63
HPS1-205ENST00000414009 CHPF2Q9P2E5 772 aa18.96■□□□□ 0.63
HPS1-205ENST00000414009 PARP3Q9Y6F1 533 aa18.96■□□□□ 0.63
HPS1-205ENST00000414009 MMP10P09238 476 aa18.95■□□□□ 0.62
HPS1-205ENST00000414009 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
HPS1-205ENST00000414009 ANXA1P04083 346 aa18.94■□□□□ 0.62
HPS1-205ENST00000414009 SLFN5Q08AF3 891 aa18.94■□□□□ 0.62
HPS1-205ENST00000414009 AIMP1Q12904 312 aaKnown RBP18.94■□□□□ 0.62
HPS1-205ENST00000414009 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
HPS1-205ENST00000414009 CAMTA2O94983 1202 aa18.93■□□□□ 0.62
HPS1-205ENST00000414009 PDIA6Q15084 440 aa18.93■□□□□ 0.62
HPS1-205ENST00000414009 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
HPS1-205ENST00000414009 SGIP1Q9BQI5 828 aa18.93■□□□□ 0.62
HPS1-205ENST00000414009 COL24A1Q17RW2 1714 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 RGL2O15211 777 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 PROSER3Q2NL68 480 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 BICDL1Q6ZP65 573 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 PLCD3Q8N3E9 789 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 DCBLD2Q96PD2 775 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 SCN7AQ01118 1682 aa18.92■□□□□ 0.62
HPS1-205ENST00000414009 NPHP1O15259 732 aa18.91■□□□□ 0.62
HPS1-205ENST00000414009 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
HPS1-205ENST00000414009 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
HPS1-205ENST00000414009 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
HPS1-205ENST00000414009 VAMP4O75379 141 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 SETDB2Q96T68 719 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 BCL2L12Q9HB09 334 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 BCORQ6W2J9 1755 aa18.9■□□□□ 0.62
HPS1-205ENST00000414009 DDX58O95786 925 aaKnown RBP18.89■□□□□ 0.61
HPS1-205ENST00000414009 NFIXQ14938 502 aa18.89■□□□□ 0.61
HPS1-205ENST00000414009 TBC1D9BQ66K14 1250 aa18.89■□□□□ 0.61
HPS1-205ENST00000414009 TCERG1O14776 1098 aaKnown RBP18.88■□□□□ 0.61
HPS1-205ENST00000414009 TM4SF1P30408 202 aa18.88■□□□□ 0.61
HPS1-205ENST00000414009 HSP90AB3PQ58FF7 597 aa18.88■□□□□ 0.61
HPS1-205ENST00000414009 ANKRD13DQ6ZTN6 518 aa18.87■□□□□ 0.61
HPS1-205ENST00000414009 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
HPS1-205ENST00000414009 CARMIL3Q8ND23 1372 aa18.87■□□□□ 0.61
HPS1-205ENST00000414009 FHDC1Q9C0D6 1143 aaPredicted RBP18.87■□□□□ 0.61
HPS1-205ENST00000414009 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
HPS1-205ENST00000414009 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 POLRMTO00411 1230 aaKnown RBP18.86■□□□□ 0.61
HPS1-205ENST00000414009 SERPINB2P05120 415 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 HLFQ16534 295 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 GIGYF2Q6Y7W6 1299 aaKnown RBP18.86■□□□□ 0.61
HPS1-205ENST00000414009 RIC3Q7Z5B4 369 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 RASEFQ8IZ41 740 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 PLBD2Q8NHP8 589 aa18.86■□□□□ 0.61
HPS1-205ENST00000414009 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
HPS1-205ENST00000414009 DDR1Q08345 913 aa18.85■□□□□ 0.61
HPS1-205ENST00000414009 TRMT2AQ8IZ69 625 aaKnown RBP18.85■□□□□ 0.61
HPS1-205ENST00000414009 ZNF428Q96B54 188 aa18.85■□□□□ 0.61
HPS1-205ENST00000414009 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
HPS1-205ENST00000414009 CD2APQ9Y5K6 639 aa18.85■□□□□ 0.61
HPS1-205ENST00000414009 NUP98P52948 1817 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms