RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 GRIN3BO60391 1043 aa22.78■■□□□ 1.24
HSPG2-204ENST00000412328 PRR5LQ6MZQ0 368 aa22.77■■□□□ 1.24
HSPG2-204ENST00000412328 CLEC4GQ6UXB4 293 aa22.77■■□□□ 1.24
HSPG2-204ENST00000412328 BICDL1Q6ZP65 573 aa22.77■■□□□ 1.24
HSPG2-204ENST00000412328 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
HSPG2-204ENST00000412328 TIAM2Q8IVF5 1701 aa22.77■■□□□ 1.23
HSPG2-204ENST00000412328 CHRNA5P30532 468 aa22.76■■□□□ 1.23
HSPG2-204ENST00000412328 PROSER3Q2NL68 480 aa22.76■■□□□ 1.23
HSPG2-204ENST00000412328 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
HSPG2-204ENST00000412328 DICER1Q9UPY3 1922 aaKnown RBP22.76■■□□□ 1.23
HSPG2-204ENST00000412328 HLFQ16534 295 aa22.75■■□□□ 1.23
HSPG2-204ENST00000412328 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
HSPG2-204ENST00000412328 TTLL7Q6ZT98 887 aa22.74■■□□□ 1.23
HSPG2-204ENST00000412328 MAP3K15Q6ZN16 1313 aa22.74■■□□□ 1.23
HSPG2-204ENST00000412328 CACNA1FO60840 1977 aa22.74■■□□□ 1.23
HSPG2-204ENST00000412328 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
HSPG2-204ENST00000412328 HOXB7P09629 217 aa22.72■■□□□ 1.23
HSPG2-204ENST00000412328 MYL6BP14649 208 aa22.72■■□□□ 1.23
HSPG2-204ENST00000412328 CCDC27Q2M243 656 aa22.72■■□□□ 1.23
HSPG2-204ENST00000412328 IBTKQ9P2D0 1353 aaPredicted RBP22.72■■□□□ 1.23
HSPG2-204ENST00000412328 RIC1Q4ADV7 1423 aa22.72■■□□□ 1.23
HSPG2-204ENST00000412328 ERVV-1B6SEH8 477 aa22.71■■□□□ 1.23
HSPG2-204ENST00000412328 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
HSPG2-204ENST00000412328 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
HSPG2-204ENST00000412328 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
HSPG2-204ENST00000412328 ANXA1P04083 346 aa22.7■■□□□ 1.22
HSPG2-204ENST00000412328 NPM2Q86SE8 214 aaKnown RBP22.7■■□□□ 1.22
HSPG2-204ENST00000412328 SETDB2Q96T68 719 aa22.7■■□□□ 1.22
HSPG2-204ENST00000412328 BCS1LQ9Y276 419 aa22.7■■□□□ 1.22
HSPG2-204ENST00000412328 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
HSPG2-204ENST00000412328 UBN2Q6ZU65 1347 aa22.7■■□□□ 1.22
HSPG2-204ENST00000412328 ABCC12Q96J65 1359 aa22.7■■□□□ 1.22
HSPG2-204ENST00000412328 CNBD1Q8NA66 436 aa22.69■■□□□ 1.22
HSPG2-204ENST00000412328 BRIP1Q9BX63 1249 aa22.69■■□□□ 1.22
HSPG2-204ENST00000412328 PIM2Q9P1W9 311 aa22.69■■□□□ 1.22
HSPG2-204ENST00000412328 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
HSPG2-204ENST00000412328 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
HSPG2-204ENST00000412328 NIP7Q9Y221 180 aaKnown RBP eCLIP22.68■■□□□ 1.22
HSPG2-204ENST00000412328 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
HSPG2-204ENST00000412328 GNAI1P63096 354 aa22.67■■□□□ 1.22
HSPG2-204ENST00000412328 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
HSPG2-204ENST00000412328 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
HSPG2-204ENST00000412328 ZBTB3Q9H5J0 574 aa22.67■■□□□ 1.22
HSPG2-204ENST00000412328 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
HSPG2-204ENST00000412328 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
HSPG2-204ENST00000412328 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
HSPG2-204ENST00000412328 DALRD3Q5D0E6 543 aaKnown RBP22.65■■□□□ 1.22
HSPG2-204ENST00000412328 DUSP27Q5VZP5 1158 aa22.65■■□□□ 1.22
HSPG2-204ENST00000412328 GIGYF2Q6Y7W6 1299 aaKnown RBP22.65■■□□□ 1.22
HSPG2-204ENST00000412328 KIF6Q6ZMV9 814 aa22.65■■□□□ 1.22
HSPG2-204ENST00000412328 C2CD5Q86YS7 1000 aa22.65■■□□□ 1.22
HSPG2-204ENST00000412328 ZNF34Q8IZ26 560 aa22.65■■□□□ 1.22
HSPG2-204ENST00000412328 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
HSPG2-204ENST00000412328 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
HSPG2-204ENST00000412328 HDGFL1Q5TGJ6 251 aa22.64■■□□□ 1.21
HSPG2-204ENST00000412328 NBPF5PQ86XG9 351 aaPredicted RBP22.64■■□□□ 1.21
HSPG2-204ENST00000412328 TAF1P21675 1872 aa22.63■■□□□ 1.21
HSPG2-204ENST00000412328 IL16Q14005 1332 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 PDE6BP35913 854 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 ST5P78524 1137 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 C8orf58Q8NAV2 365 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 SNED1Q8TER0 1413 aa22.62■■□□□ 1.21
HSPG2-204ENST00000412328 LRRC37AA6NMS7 1700 aa22.61■■□□□ 1.21
HSPG2-204ENST00000412328 NTSR2O95665 410 aa22.61■■□□□ 1.21
HSPG2-204ENST00000412328 SRGNP10124 158 aa22.61■■□□□ 1.21
HSPG2-204ENST00000412328 TSR2Q969E8 191 aaKnown RBP22.61■■□□□ 1.21
HSPG2-204ENST00000412328 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
HSPG2-204ENST00000412328 H0YIN7 160 aa22.6■■□□□ 1.21
HSPG2-204ENST00000412328 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
HSPG2-204ENST00000412328 GPTP24298 496 aa22.59■■□□□ 1.21
HSPG2-204ENST00000412328 PRELPP51888 382 aa22.59■■□□□ 1.21
HSPG2-204ENST00000412328 TSPYL6Q8N831 410 aa22.59■■□□□ 1.21
HSPG2-204ENST00000412328 TTLL6Q8N841 843 aa22.59■■□□□ 1.21
HSPG2-204ENST00000412328 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
HSPG2-204ENST00000412328 MYH3P11055 1940 aa22.59■■□□□ 1.21
HSPG2-204ENST00000412328 CRY2Q49AN0 593 aa22.58■■□□□ 1.21
HSPG2-204ENST00000412328 SUSD4Q5VX71 490 aa22.58■■□□□ 1.21
HSPG2-204ENST00000412328 STYK1Q6J9G0 422 aa22.58■■□□□ 1.21
HSPG2-204ENST00000412328 TPTE2Q6XPS3 522 aa22.58■■□□□ 1.21
HSPG2-204ENST00000412328 COL4A1P02462 1669 aa22.58■■□□□ 1.2
HSPG2-204ENST00000412328 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
HSPG2-204ENST00000412328 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
HSPG2-204ENST00000412328 NUTM1Q86Y26 1132 aa22.57■■□□□ 1.2
HSPG2-204ENST00000412328 FAM177BA6PVY3 158 aa22.56■■□□□ 1.2
HSPG2-204ENST00000412328 NFKBIEO00221 500 aa22.56■■□□□ 1.2
HSPG2-204ENST00000412328 ERFEQ4G0M1 354 aa22.56■■□□□ 1.2
HSPG2-204ENST00000412328 ARHGAP27Q6ZUM4 889 aa22.56■■□□□ 1.2
HSPG2-204ENST00000412328 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
HSPG2-204ENST00000412328 RASSF7Q02833 373 aa22.55■■□□□ 1.2
HSPG2-204ENST00000412328 AIMP1Q12904 312 aaKnown RBP22.55■■□□□ 1.2
HSPG2-204ENST00000412328 MASTLQ96GX5 879 aa22.55■■□□□ 1.2
HSPG2-204ENST00000412328 NYXQ9GZU5 481 aa22.55■■□□□ 1.2
HSPG2-204ENST00000412328 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
HSPG2-204ENST00000412328 ELL2O00472 640 aaPredicted RBP22.54■■□□□ 1.2
HSPG2-204ENST00000412328 PARP10Q53GL7 1025 aa22.54■■□□□ 1.2
HSPG2-204ENST00000412328 PRPF40BQ6NWY9 871 aaKnown RBP22.54■■□□□ 1.2
HSPG2-204ENST00000412328 HYPKQ9NX55 129 aa22.54■■□□□ 1.2
HSPG2-204ENST00000412328 RNF123Q5XPI4 1314 aa22.54■■□□□ 1.2
HSPG2-204ENST00000412328 C3orf67Q6ZVT6 689 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms