RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
TSPAN9-202ENST00000407263 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
TSPAN9-202ENST00000407263 IL16Q14005 1332 aa13.33□□□□□ -0.28
TSPAN9-202ENST00000407263 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 PXDNLA1KZ92 1463 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 NFIXQ14938 502 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 KIF6Q6ZMV9 814 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 ZBTB3Q9H5J0 574 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 CHD4Q14839 1912 aa13.32□□□□□ -0.28
TSPAN9-202ENST00000407263 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 HOXB7P09629 217 aa13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 PDIA6Q15084 440 aa13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
TSPAN9-202ENST00000407263 DDX60Q8IY21 1712 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-202ENST00000407263 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
TSPAN9-202ENST00000407263 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 HLFQ16534 295 aa13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 ZNF652Q9Y2D9 606 aa13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 ATP10DQ9P241 1426 aa13.29□□□□□ -0.28
TSPAN9-202ENST00000407263 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
TSPAN9-202ENST00000407263 TM4SF1P30408 202 aa13.28□□□□□ -0.28
TSPAN9-202ENST00000407263 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-202ENST00000407263 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
TSPAN9-202ENST00000407263 MYH3P11055 1940 aa13.27□□□□□ -0.28
TSPAN9-202ENST00000407263 NPHP1O15259 732 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 SERPINB2P05120 415 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 GPTP24298 496 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 DBF4Q9UBU7 674 aaPredicted RBP13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
TSPAN9-202ENST00000407263 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
TSPAN9-202ENST00000407263 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
TSPAN9-202ENST00000407263 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
TSPAN9-202ENST00000407263 SPEF2Q9C093 1822 aa13.26□□□□□ -0.29
TSPAN9-202ENST00000407263 TAF1P21675 1872 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 UBN2Q6ZU65 1347 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
TSPAN9-202ENST00000407263 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
TSPAN9-202ENST00000407263 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 ERVV-1B6SEH8 477 aa13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 E9PSI1 815 aa13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 DPEP1P16444 411 aa13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 CHRNA5P30532 468 aa13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
TSPAN9-202ENST00000407263 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
TSPAN9-202ENST00000407263 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
TSPAN9-202ENST00000407263 ST5P78524 1137 aa13.22□□□□□ -0.29
TSPAN9-202ENST00000407263 GPR162Q16538 588 aa13.22□□□□□ -0.29
TSPAN9-202ENST00000407263 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 RGL2O15211 777 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 VAMP4O75379 141 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 G2E3Q7L622 706 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 PLBD2Q8NHP8 589 aa13.21□□□□□ -0.29
TSPAN9-202ENST00000407263 SBF1O95248 1867 aa13.21□□□□□ -0.3
TSPAN9-202ENST00000407263 ADCY9O60503 1353 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
TSPAN9-202ENST00000407263 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 NTSR2O95665 410 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 TGFB2P61812 414 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
TSPAN9-202ENST00000407263 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms