RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GCGRP47871 477 aa14.94□□□□□ -0.02
RTN1-203ENST00000395090 KIAA0232Q92628 1395 aa14.94□□□□□ -0.02
RTN1-203ENST00000395090 HRO43593 1189 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 KDM4AO75164 1064 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 NEFMP07197 916 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 PIP4K2BP78356 416 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 RIC3Q7Z5B4 369 aa14.93□□□□□ -0.02
RTN1-203ENST00000395090 COL18A1P39060 1754 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 WDR63Q8IWG1 891 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 LTV1Q96GA3 475 aaPredicted RBP14.92□□□□□ -0.02
RTN1-203ENST00000395090 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.92□□□□□ -0.02
RTN1-203ENST00000395090 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
RTN1-203ENST00000395090 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 TRMT2AQ8IZ69 625 aaKnown RBP14.92□□□□□ -0.02
RTN1-203ENST00000395090 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
RTN1-203ENST00000395090 RNF40O75150 1001 aa14.91□□□□□ -0.02
RTN1-203ENST00000395090 RIPK4P57078 832 aa14.91□□□□□ -0.02
RTN1-203ENST00000395090 LIMD1Q9UGP4 676 aa14.91□□□□□ -0.02
RTN1-203ENST00000395090 NCAPD2Q15021 1401 aa14.9□□□□□ -0.02
RTN1-203ENST00000395090 USP46P62068 366 aa14.9□□□□□ -0.02
RTN1-203ENST00000395090 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
RTN1-203ENST00000395090 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
RTN1-203ENST00000395090 COL16A1Q07092 1604 aaPredicted RBP14.9□□□□□ -0.02
RTN1-203ENST00000395090 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
RTN1-203ENST00000395090 MOXD2PA6NHM9 499 aa14.89□□□□□ -0.03
RTN1-203ENST00000395090 SPTLC1O15269 473 aa14.89□□□□□ -0.03
RTN1-203ENST00000395090 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
RTN1-203ENST00000395090 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
RTN1-203ENST00000395090 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
RTN1-203ENST00000395090 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
RTN1-203ENST00000395090 ABCA3Q99758 1704 aa14.88□□□□□ -0.03
RTN1-203ENST00000395090 E9PSI1 815 aa14.88□□□□□ -0.03
RTN1-203ENST00000395090 GJA5P36382 358 aa14.88□□□□□ -0.03
RTN1-203ENST00000395090 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
RTN1-203ENST00000395090 LRCH3Q96II8 777 aa14.87□□□□□ -0.03
RTN1-203ENST00000395090 RGPD5Q99666 1765 aa14.86□□□□□ -0.03
RTN1-203ENST00000395090 NDUFV2P19404 249 aa14.86□□□□□ -0.03
RTN1-203ENST00000395090 FLIIQ13045 1269 aa14.86□□□□□ -0.03
RTN1-203ENST00000395090 TUSC1Q2TAM9 212 aa14.86□□□□□ -0.03
RTN1-203ENST00000395090 IL16Q14005 1332 aa14.86□□□□□ -0.03
RTN1-203ENST00000395090 CAMTA1Q9Y6Y1 1673 aa14.85□□□□□ -0.03
RTN1-203ENST00000395090 GOLGA8CPA6NN73 597 aa14.85□□□□□ -0.03
RTN1-203ENST00000395090 LMOD3Q0VAK6 560 aa14.85□□□□□ -0.03
RTN1-203ENST00000395090 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
RTN1-203ENST00000395090 USHBP1Q8N6Y0 703 aa14.85□□□□□ -0.03
RTN1-203ENST00000395090 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
RTN1-203ENST00000395090 LMO7Q8WWI1 1683 aa14.85□□□□□ -0.03
RTN1-203ENST00000395090 HOXA2O43364 376 aa14.84□□□□□ -0.03
RTN1-203ENST00000395090 CFHP08603 1231 aa14.84□□□□□ -0.03
RTN1-203ENST00000395090 GAS2L2Q8NHY3 880 aa14.84□□□□□ -0.03
RTN1-203ENST00000395090 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
RTN1-203ENST00000395090 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
RTN1-203ENST00000395090 ANKK1Q8NFD2 765 aa14.83□□□□□ -0.04
RTN1-203ENST00000395090 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
RTN1-203ENST00000395090 WDR17Q8IZU2 1322 aa14.83□□□□□ -0.04
RTN1-203ENST00000395090 RGPD2P0DJD1 1756 aa14.83□□□□□ -0.04
RTN1-203ENST00000395090 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.04
RTN1-203ENST00000395090 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
RTN1-203ENST00000395090 CSPP1Q1MSJ5 1256 aa14.82□□□□□ -0.04
RTN1-203ENST00000395090 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
RTN1-203ENST00000395090 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
RTN1-203ENST00000395090 AMOTQ4VCS5 1084 aa14.81□□□□□ -0.04
RTN1-203ENST00000395090 PPP2R2DQ66LE6 453 aa14.81□□□□□ -0.04
RTN1-203ENST00000395090 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
RTN1-203ENST00000395090 JCADQ9P266 1359 aa14.81□□□□□ -0.04
RTN1-203ENST00000395090 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
RTN1-203ENST00000395090 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 KMT5BQ4FZB7 885 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 GRIPAP1Q4V328 841 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
RTN1-203ENST00000395090 CARD10Q9BWT7 1032 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 KRTAP3-3Q9BYR6 98 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 KRTAP3-2Q9BYR7 98 aa14.8□□□□□ -0.04
RTN1-203ENST00000395090 RNF123Q5XPI4 1314 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 DLG5Q8TDM6 1919 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 FDX1P10109 184 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 RFC5P40937 340 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 EVA1CP58658 441 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 FUT2Q10981 343 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 SUPT16HQ9Y5B9 1047 aaKnown RBP14.79□□□□□ -0.04
RTN1-203ENST00000395090 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
RTN1-203ENST00000395090 COL14A1Q05707 1796 aaKnown RBP14.79□□□□□ -0.04
RTN1-203ENST00000395090 GNAT3A8MTJ3 354 aa14.78□□□□□ -0.04
RTN1-203ENST00000395090 LARP1Q6PKG0 1096 aaKnown RBP14.78□□□□□ -0.04
RTN1-203ENST00000395090 IFT57Q9NWB7 429 aa14.78□□□□□ -0.04
RTN1-203ENST00000395090 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
RTN1-203ENST00000395090 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.04
RTN1-203ENST00000395090 RAPGEF4Q8WZA2 1011 aa14.77□□□□□ -0.04
RTN1-203ENST00000395090 THUMPD2Q9BTF0 503 aaKnown RBP14.77□□□□□ -0.04
RTN1-203ENST00000395090 SOWAHBA6NEL2 793 aa14.77□□□□□ -0.05
RTN1-203ENST00000395090 HSPA1LP34931 641 aa14.77□□□□□ -0.05
RTN1-203ENST00000395090 GNAI1P63096 354 aa14.77□□□□□ -0.05
RTN1-203ENST00000395090 DCTN1Q14203 1278 aa14.77□□□□□ -0.05
RTN1-203ENST00000395090 QPCTQ16769 361 aa14.77□□□□□ -0.05
RTN1-203ENST00000395090 SPATA31A6Q5VVP1 1343 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms