RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
RFC4-202ENST00000392481 PDIA6Q15084 440 aa15.4■□□□□ 0.06
RFC4-202ENST00000392481 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
RFC4-202ENST00000392481 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
RFC4-202ENST00000392481 MAP3K15Q6ZN16 1313 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 CHRNA5P30532 468 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 BRIP1Q9BX63 1249 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
RFC4-202ENST00000392481 HLFQ16534 295 aa15.38■□□□□ 0.05
RFC4-202ENST00000392481 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
RFC4-202ENST00000392481 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
RFC4-202ENST00000392481 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
RFC4-202ENST00000392481 NPHP1O15259 732 aa15.37■□□□□ 0.05
RFC4-202ENST00000392481 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
RFC4-202ENST00000392481 DALRD3Q5D0E6 543 aaKnown RBP15.37■□□□□ 0.05
RFC4-202ENST00000392481 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
RFC4-202ENST00000392481 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
RFC4-202ENST00000392481 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
RFC4-202ENST00000392481 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
RFC4-202ENST00000392481 NUP98P52948 1817 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 H0YIN7 160 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 PDE6BP35913 854 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 ST5P78524 1137 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 FAM9BQ8IZU0 186 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
RFC4-202ENST00000392481 ATP10DQ9P241 1426 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 ANXA1P04083 346 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 TPTE2Q6XPS3 522 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 C2CD5Q86YS7 1000 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 IL16Q14005 1332 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
RFC4-202ENST00000392481 GIGYF2Q6Y7W6 1299 aaKnown RBP15.34■□□□□ 0.05
RFC4-202ENST00000392481 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
RFC4-202ENST00000392481 DLEC1Q9Y238 1755 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
RFC4-202ENST00000392481 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
RFC4-202ENST00000392481 ZNF34Q8IZ26 560 aa15.33■□□□□ 0.04
RFC4-202ENST00000392481 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.04
RFC4-202ENST00000392481 ZNF784Q8NCA9 323 aaPredicted RBP15.33■□□□□ 0.04
RFC4-202ENST00000392481 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
RFC4-202ENST00000392481 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
RFC4-202ENST00000392481 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
RFC4-202ENST00000392481 ELL2O00472 640 aaPredicted RBP15.32■□□□□ 0.04
RFC4-202ENST00000392481 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
RFC4-202ENST00000392481 WDR63Q8IWG1 891 aa15.32■□□□□ 0.04
RFC4-202ENST00000392481 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
RFC4-202ENST00000392481 GPTP24298 496 aa15.31■□□□□ 0.04
RFC4-202ENST00000392481 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
RFC4-202ENST00000392481 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
RFC4-202ENST00000392481 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
RFC4-202ENST00000392481 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.044e-10■□□□□ 8.7
RFC4-202ENST00000392481 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
RFC4-202ENST00000392481 UBN2Q6ZU65 1347 aa15.31■□□□□ 0.04
RFC4-202ENST00000392481 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
RFC4-202ENST00000392481 SRGNP10124 158 aa15.3■□□□□ 0.04
RFC4-202ENST00000392481 PARP10Q53GL7 1025 aa15.3■□□□□ 0.04
RFC4-202ENST00000392481 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
RFC4-202ENST00000392481 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
RFC4-202ENST00000392481 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 SUSD4Q5VX71 490 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 MASTLQ96GX5 879 aa15.29■□□□□ 0.04
RFC4-202ENST00000392481 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
RFC4-202ENST00000392481 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
RFC4-202ENST00000392481 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
RFC4-202ENST00000392481 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
RFC4-202ENST00000392481 ADCY9O60503 1353 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 NTSR2O95665 410 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 NPR1P16066 1061 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 ERFEQ4G0M1 354 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.04
RFC4-202ENST00000392481 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.03
RFC4-202ENST00000392481 ABCC12Q96J65 1359 aa15.27■□□□□ 0.03
RFC4-202ENST00000392481 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.03
RFC4-202ENST00000392481 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.03
RFC4-202ENST00000392481 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
RFC4-202ENST00000392481 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
RFC4-202ENST00000392481 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
RFC4-202ENST00000392481 NLRP10Q86W26 655 aa15.26■□□□□ 0.03
RFC4-202ENST00000392481 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
RFC4-202ENST00000392481 CRY2Q49AN0 593 aa15.25■□□□□ 0.03
RFC4-202ENST00000392481 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
RFC4-202ENST00000392481 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
RFC4-202ENST00000392481 SLX4Q8IY92 1834 aa15.25■□□□□ 0.03
RFC4-202ENST00000392481 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms