RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SLC43A3Q8NBI5 491 aa7.46□□□□□ -1.21
ERCC4-202ENST00000389138 TRIM34Q9BYJ4 488 aa7.46□□□□□ -1.21
ERCC4-202ENST00000389138 CAPN10Q9HC96 672 aa7.46□□□□□ -1.21
ERCC4-202ENST00000389138 ABCC1P33527 1531 aa7.46□□□□□ -1.22
ERCC4-202ENST00000389138 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
ERCC4-202ENST00000389138 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
ERCC4-202ENST00000389138 DNAJA1P31689 397 aaKnown RBP7.46□□□□□ -1.22
ERCC4-202ENST00000389138 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.22
ERCC4-202ENST00000389138 RTL5Q5HYW3 569 aaPredicted RBP7.46□□□□□ -1.22
ERCC4-202ENST00000389138 TJAP1Q5JTD0 557 aa7.46□□□□□ -1.22
ERCC4-202ENST00000389138 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
ERCC4-202ENST00000389138 DDX56Q9NY93 547 aaKnown RBP7.46□□□□□ -1.22
ERCC4-202ENST00000389138 PREX2Q70Z35 1606 aa7.46□□□□□ -1.22
ERCC4-202ENST00000389138 CCDC189A1A4V9 331 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
ERCC4-202ENST00000389138 NDUFV2P19404 249 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 BDNFP23560 247 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 HSD3B2P26439 372 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 GYS2P54840 703 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 PRPF38BQ5VTL8 546 aaKnown RBP7.45□□□□□ -1.22
ERCC4-202ENST00000389138 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 ARMC5Q96C12 935 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 GMLQ99445 158 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 SLC27A5Q9Y2P5 690 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 COPS2P61201 443 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 KCNC4Q03721 635 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 EFCAB2Q5VUJ9 269 aa7.45□□□□□ -1.22
ERCC4-202ENST00000389138 HELBQ8NG08 1087 aaPredicted RBP7.45□□□□□ -1.22
ERCC4-202ENST00000389138 XIRP1Q702N8 1843 aaKnown RBP7.44□□□□□ -1.22
ERCC4-202ENST00000389138 ZPR1O75312 459 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
ERCC4-202ENST00000389138 AFAP1Q8N556 730 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 ZCRB1Q8TBF4 217 aaKnown RBP7.44□□□□□ -1.22
ERCC4-202ENST00000389138 ZMYM3Q14202 1370 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 A2ML1A8K2U0 1454 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 IQGAP1P46940 1657 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 VPS8Q8N3P4 1428 aa7.44□□□□□ -1.22
ERCC4-202ENST00000389138 ATP9BO43861 1147 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 IFFO2Q5TF58 517 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 SECISBP2LQ93073 1101 aaKnown RBP7.43□□□□□ -1.22
ERCC4-202ENST00000389138 FAM161BQ96MY7 647 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 DEPDC5O75140 1603 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 PLXNC1O60486 1568 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 LRRIQ1Q96JM4 1722 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 ECM1Q16610 540 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 RNF187Q5TA31 235 aaPredicted RBP7.43□□□□□ -1.22
ERCC4-202ENST00000389138 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 NLRP2Q9NX02 1062 aa7.43□□□□□ -1.22
ERCC4-202ENST00000389138 S100BP04271 92 aaPredicted RBP7.42□□□□□ -1.22
ERCC4-202ENST00000389138 FANCCQ00597 558 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 MYBPC2Q14324 1141 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 CRTC2Q53ET0 693 aaPredicted RBP7.42□□□□□ -1.22
ERCC4-202ENST00000389138 BRICD5Q6PL45 260 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 POTEAQ6S8J7 498 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 OSBPL2Q9H1P3 480 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 PCDHB15Q9Y5E8 787 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 LILRB3O75022 631 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 GUCA2AQ02747 115 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 MTMR2Q13614 643 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ERCC4-202ENST00000389138 CDC42BPAQ5VT25 1732 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 EXOC5O00471 708 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 ADH1BP00325 375 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 MAPK1P28482 360 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 AMPD3Q01432 767 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 JDP2Q8WYK2 163 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 HLA-CQ95604 372 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 SPC25Q9HBM1 224 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 COMMD10Q9Y6G5 202 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 SAMD9LQ8IVG5 1584 aa7.41□□□□□ -1.22
ERCC4-202ENST00000389138 LRRC7Q96NW7 1537 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 SLFNL1Q499Z3 407 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 MAP9Q49MG5 647 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 RETREG3Q86VR2 466 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
ERCC4-202ENST00000389138 TMEM87AQ8NBN3 555 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 SPSB2Q99619 263 aa7.4□□□□□ -1.22
ERCC4-202ENST00000389138 PIK3CDO00329 1044 aa7.4□□□□□ -1.23
ERCC4-202ENST00000389138 PDE6BP35913 854 aa7.4□□□□□ -1.23
ERCC4-202ENST00000389138 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 MSS51Q4VC12 460 aa7.4□□□□□ -1.23
ERCC4-202ENST00000389138 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 PNISRQ8TF01 805 aaKnown RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 USB1Q9BQ65 265 aaKnown RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 QTRT2Q9H974 415 aaKnown RBP7.4□□□□□ -1.23
ERCC4-202ENST00000389138 RNF19AQ9NV58 838 aa7.4□□□□□ -1.23
ERCC4-202ENST00000389138 ZC3H13Q5T200 1668 aaKnown RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 INO80Q9ULG1 1556 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 H3BRB1 525 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
ERCC4-202ENST00000389138 RBM10P98175 930 aaKnown RBP7.39□□□□□ -1.23
ERCC4-202ENST00000389138 CBLBQ13191 982 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms