RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
GNE-201ENST00000377902 ST3GAL1Q11201 340 aa21.59■■□□□ 1.05
GNE-201ENST00000377902 MTMR6Q9Y217 621 aa21.59■■□□□ 1.05
GNE-201ENST00000377902 OS9Q13438 667 aaPredicted RBP21.58■■□□□ 1.05
GNE-201ENST00000377902 ZNF710Q8N1W2 664 aa21.58■■□□□ 1.05
GNE-201ENST00000377902 SPC24Q8NBT2 197 aa21.58■■□□□ 1.05
GNE-201ENST00000377902 TTC21AQ8NDW8 1320 aa21.58■■□□□ 1.04
GNE-201ENST00000377902 VPS37CA5D8V6 355 aaPredicted RBP21.58■■□□□ 1.04
GNE-201ENST00000377902 FAM173BQ6P4H8 233 aa21.58■■□□□ 1.04
GNE-201ENST00000377902 LGR6Q9HBX8 967 aa21.58■■□□□ 1.04
GNE-201ENST00000377902 PDRG1Q9NUG6 133 aa21.57■■□□□ 1.04
GNE-201ENST00000377902 TNRQ92752 1358 aa21.57■■□□□ 1.04
GNE-201ENST00000377902 EPB41L2O43491 1005 aaKnown RBP21.57■■□□□ 1.04
GNE-201ENST00000377902 BEND3Q5T5X7 828 aa21.57■■□□□ 1.04
GNE-201ENST00000377902 DIAPH3Q9NSV4 1193 aa21.57■■□□□ 1.04
GNE-201ENST00000377902 PA2G4Q9UQ80 394 aaKnown RBP21.57■■□□□ 1.04
GNE-201ENST00000377902 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
GNE-201ENST00000377902 ME3Q16798 604 aa21.56■■□□□ 1.04
GNE-201ENST00000377902 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
GNE-201ENST00000377902 FERMT3Q86UX7 667 aa21.56■■□□□ 1.04
GNE-201ENST00000377902 KCNF1Q9H3M0 494 aa21.56■■□□□ 1.04
GNE-201ENST00000377902 PYCARDQ9ULZ3 195 aa21.56■■□□□ 1.04
GNE-201ENST00000377902 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
GNE-201ENST00000377902 LETM1O95202 739 aaPredicted RBP21.55■■□□□ 1.04
GNE-201ENST00000377902 PRDM4Q9UKN5 801 aa21.55■■□□□ 1.04
GNE-201ENST00000377902 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.55■■□□□ 1.04
GNE-201ENST00000377902 RGPD8O14715 1765 aaPredicted RBP21.55■■□□□ 1.04
GNE-201ENST00000377902 CAMK4Q16566 473 aa21.54■■□□□ 1.04
GNE-201ENST00000377902 DNAAF4Q8WXU2 420 aa21.54■■□□□ 1.04
GNE-201ENST00000377902 TCEANC2Q96MN5 208 aa21.54■■□□□ 1.04
GNE-201ENST00000377902 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
GNE-201ENST00000377902 ATP6V1DQ9Y5K8 247 aa21.53■■□□□ 1.04
GNE-201ENST00000377902 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.04
GNE-201ENST00000377902 TPCN1Q9ULQ1 816 aa21.52■■□□□ 1.04
GNE-201ENST00000377902 GLRX3O76003 335 aaKnown RBP21.52■■□□□ 1.04
GNE-201ENST00000377902 C14orf37Q86TY3 774 aa21.52■■□□□ 1.04
GNE-201ENST00000377902 FAM227BQ96M60 508 aa21.52■■□□□ 1.04
GNE-201ENST00000377902 SPTLC3Q9NUV7 552 aa21.52■■□□□ 1.04
GNE-201ENST00000377902 NWD1Q149M9 1564 aa21.52■■□□□ 1.04
GNE-201ENST00000377902 CEBPAP49715 358 aaPredicted RBP21.51■■□□□ 1.03
GNE-201ENST00000377902 VPS53Q5VIR6 699 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 MTERF4Q7Z6M4 381 aaKnown RBP21.51■■□□□ 1.03
GNE-201ENST00000377902 PRIMPOLQ96LW4 560 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 ZSWIM6Q9HCJ5 1215 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 CYP46A1Q9Y6A2 500 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 CACNA1FO60840 1977 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
GNE-201ENST00000377902 CDC37L1Q7L3B6 337 aa21.5■■□□□ 1.03
GNE-201ENST00000377902 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
GNE-201ENST00000377902 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
GNE-201ENST00000377902 LIG1P18858 919 aa21.5■■□□□ 1.03
GNE-201ENST00000377902 CLASRPQ8N2M8 674 aaKnown RBP21.5■■□□□ 1.03
GNE-201ENST00000377902 KIAA1524Q8TCG1 905 aa21.49■■□□□ 1.03
GNE-201ENST00000377902 CCDC94Q9BW85 323 aaPredicted RBP21.49■■□□□ 1.03
GNE-201ENST00000377902 UBR1Q8IWV7 1749 aa21.49■■□□□ 1.03
GNE-201ENST00000377902 HMGN5P82970 282 aaKnown RBP21.49■■□□□ 1.03
GNE-201ENST00000377902 NECTIN1Q15223 517 aa21.49■■□□□ 1.03
GNE-201ENST00000377902 ADCY9O60503 1353 aa21.49■■□□□ 1.03
GNE-201ENST00000377902 DIP2BQ9P265 1576 aa21.48■■□□□ 1.03
GNE-201ENST00000377902 CWF19L2Q2TBE0 894 aaKnown RBP21.48■■□□□ 1.03
GNE-201ENST00000377902 LARP1BQ659C4 914 aaKnown RBP21.48■■□□□ 1.03
GNE-201ENST00000377902 LUZP1Q86V48 1076 aa21.48■■□□□ 1.03
GNE-201ENST00000377902 CKAP2LQ8IYA6 745 aa21.48■■□□□ 1.03
GNE-201ENST00000377902 ECHDC1Q9NTX5 307 aa21.48■■□□□ 1.03
GNE-201ENST00000377902 RBM8AQ9Y5S9 174 aaKnown RBP21.48■■□□□ 1.03
GNE-201ENST00000377902 TTC41PQ6P2S7 1318 aa21.48■■□□□ 1.03
GNE-201ENST00000377902 SETD1BQ9UPS6 1966 aaKnown RBP21.48■■□□□ 1.03
GNE-201ENST00000377902 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
GNE-201ENST00000377902 KCNJ4P48050 445 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 AACSQ86V21 672 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 RUFY2Q8WXA3 655 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 TFIP11Q9UBB9 837 aaKnown RBP21.47■■□□□ 1.03
GNE-201ENST00000377902 IFIT2P09913 472 aaKnown RBP21.47■■□□□ 1.03
GNE-201ENST00000377902 CREB3L3Q68CJ9 461 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 KIF3AQ9Y496 699 aa21.47■■□□□ 1.03
GNE-201ENST00000377902 USP42Q9H9J4 1324 aaKnown RBP21.47■■□□□ 1.03
GNE-201ENST00000377902 GTF2F1P35269 517 aaKnown RBP eCLIP21.46■■□□□ 1.03
GNE-201ENST00000377902 CCDC8Q9H0W5 538 aaPredicted RBP21.46■■□□□ 1.03
GNE-201ENST00000377902 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 PLEKHG1Q9ULL1 1385 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 CCDC192P0DO97 292 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 PTGS1P23219 599 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 CBX1P83916 185 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 NBPF6Q5VWK0 638 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 NBPF4Q96M43 638 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
GNE-201ENST00000377902 MAP3K2Q9Y2U5 619 aa21.46■■□□□ 1.03
GNE-201ENST00000377902 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.03
GNE-201ENST00000377902 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.03
GNE-201ENST00000377902 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.03
GNE-201ENST00000377902 SH2B1Q9NRF2 756 aaPredicted RBP21.45■■□□□ 1.03
GNE-201ENST00000377902 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.03
GNE-201ENST00000377902 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.03
GNE-201ENST00000377902 STK3Q13188 491 aa21.45■■□□□ 1.02
GNE-201ENST00000377902 ZSCAN31Q96LW9 406 aaPredicted RBP21.45■■□□□ 1.02
GNE-201ENST00000377902 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms