RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 CC2D2BQ6DHV5 1058 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 NECTIN2Q92692 538 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 PDGFDQ9GZP0 370 aaPredicted RBP6.1□□□□□ -1.43
CTSS-201ENST00000368985 CDHR2Q9BYE9 1310 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 MMP14P50281 582 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 ARHGEF1Q92888 912 aaKnown RBP6.1□□□□□ -1.43
CTSS-201ENST00000368985 ASAP1Q9ULH1 1129 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 PARP3Q9Y6F1 533 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 RIPK4P57078 832 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 NPM2Q86SE8 214 aaKnown RBP6.1□□□□□ -1.43
CTSS-201ENST00000368985 TSR2Q969E8 191 aaKnown RBP6.1□□□□□ -1.43
CTSS-201ENST00000368985 ATF5Q9Y2D1 282 aaPredicted RBP6.1□□□□□ -1.43
CTSS-201ENST00000368985 SLX4Q8IY92 1834 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 CLUAP1Q96AJ1 413 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 CHMP4AQ9BY43 222 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 MIS18AQ9NYP9 233 aa6.1□□□□□ -1.43
CTSS-201ENST00000368985 GIGYF1O75420 1035 aaPredicted RBP6.09□□□□□ -1.43
CTSS-201ENST00000368985 STARD3NLO95772 234 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 APLP1P51693 650 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
CTSS-201ENST00000368985 GNPATO15228 680 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 L3MBTL3Q96JM7 780 aaPredicted RBP6.09□□□□□ -1.43
CTSS-201ENST00000368985 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 PLEKHF1Q96S99 279 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 BRIP1Q9BX63 1249 aa6.09□□□□□ -1.43
CTSS-201ENST00000368985 TAF1P21675 1872 aa6.09□□□□□ -1.44
CTSS-201ENST00000368985 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.44
CTSS-201ENST00000368985 TMC4Q7Z404 712 aa6.09□□□□□ -1.44
CTSS-201ENST00000368985 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.44
CTSS-201ENST00000368985 PDE6BP35913 854 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 PIM2Q9P1W9 311 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 LMOD3Q0VAK6 560 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 MTHFSDQ2M296 383 aaKnown RBP6.08□□□□□ -1.44
CTSS-201ENST00000368985 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 NGEFQ8N5V2 710 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 BCL2L12Q9HB09 334 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 COL4A1P02462 1669 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 KDM2BQ8NHM5 1336 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 GOLGA2Q08379 1002 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 ZNF790Q6PG37 636 aa6.08□□□□□ -1.44
CTSS-201ENST00000368985 KIF3CO14782 793 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 HSPA6P17066 643 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 RFC4P35249 363 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 MCM10Q7L590 875 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 PHACTR3Q96KR7 559 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 PAPPA2Q9BXP8 1791 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 HOXA10P31260 410 aaPredicted RBP6.07□□□□□ -1.44
CTSS-201ENST00000368985 DDR1Q08345 913 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 CRY2Q49AN0 593 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 RTF1Q92541 710 aaKnown RBP6.07□□□□□ -1.44
CTSS-201ENST00000368985 CAMTA2O94983 1202 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 MMP10P09238 476 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 AMIGO3Q86WK7 504 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 RUNDC1Q96C34 613 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 ZNF652Q9Y2D9 606 aa6.07□□□□□ -1.44
CTSS-201ENST00000368985 ZBED9Q6R2W3 1325 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 GPR162Q16538 588 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 SLC10A5Q5PT55 438 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 SPINK5Q9NQ38 1064 aaPredicted RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 ZNF330Q9Y3S2 320 aaPredicted RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 COL1A1P02452 1464 aaPredicted RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 RTL9Q8NET4 1388 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 TOMM70O94826 608 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 DALRD3Q5D0E6 543 aaKnown RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 SYTL4Q96C24 671 aaPredicted RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 PSMD1Q99460 953 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 SNRPA1P09661 255 aaKnown RBP6.06□□□□□ -1.44
CTSS-201ENST00000368985 CNKSR1Q969H4 720 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 NYXQ9GZU5 481 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 RCAN3Q9UKA8 241 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 SLC4A2P04920 1241 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 IL17REQ8NFR9 667 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 C7orf43Q8WVR3 580 aa6.06□□□□□ -1.44
CTSS-201ENST00000368985 NFATC2IPQ8NCF5 419 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 LMNB1P20700 586 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 RTFDC1Q9BY42 306 aaPredicted RBP6.05□□□□□ -1.44
CTSS-201ENST00000368985 ZPR1O75312 459 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 NFE2L2Q16236 605 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 PARP10Q53GL7 1025 aa6.05□□□□□ -1.44
CTSS-201ENST00000368985 BCAR3O75815 825 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 LRP10Q7Z4F1 713 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 CRAMP1Q96RY5 1269 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 NPR1P16066 1061 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 EIF2S2P20042 333 aaKnown RBP6.04□□□□□ -1.44
CTSS-201ENST00000368985 TMPOP42166 694 aaKnown RBP6.04□□□□□ -1.44
CTSS-201ENST00000368985 MAPK8IP2Q13387 824 aaPredicted RBP6.04□□□□□ -1.44
CTSS-201ENST00000368985 TAF7Q15545 349 aaPredicted RBP6.04□□□□□ -1.44
CTSS-201ENST00000368985 WWC1Q8IX03 1113 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 TTC5Q8N0Z6 440 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 IL16Q14005 1332 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 DPEP1P16444 411 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 NFIXQ14938 502 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 KRT24Q2M2I5 525 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 MASTLQ96GX5 879 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 CCDC136Q96JN2 1154 aa6.04□□□□□ -1.44
CTSS-201ENST00000368985 TRIM28Q13263 835 aaKnown RBP6.03□□□□□ -1.44
CTSS-201ENST00000368985 HSP90AB3PQ58FF7 597 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms