RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 IDEP14735 1019 aa21.02■□□□□ 0.95
SNX27-202ENST00000368841 BICD1Q96G01 975 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 CATIPQ7Z7H3 387 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 IQCA1Q86XH1 822 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 RBM25P49756 843 aaKnown RBP21.01■□□□□ 0.95
SNX27-202ENST00000368841 CCDC183Q5T5S1 534 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 LRRC2Q9BYS8 371 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 NOP2P46087 812 aaKnown RBP21.01■□□□□ 0.95
SNX27-202ENST00000368841 HLTFQ14527 1009 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNX27-202ENST00000368841 TMEM67Q5HYA8 995 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 MYO1BO43795 1136 aa21.01■□□□□ 0.95
SNX27-202ENST00000368841 GLRX3O76003 335 aaKnown RBP21.01■□□□□ 0.95
SNX27-202ENST00000368841 CCDC40Q4G0X9 1142 aa21■□□□□ 0.95
SNX27-202ENST00000368841 RNF216Q9NWF9 866 aaPredicted RBP21■□□□□ 0.95
SNX27-202ENST00000368841 CETN2P41208 172 aa21■□□□□ 0.95
SNX27-202ENST00000368841 ANO10Q9NW15 660 aa21■□□□□ 0.95
SNX27-202ENST00000368841 RPAP2Q8IXW5 612 aaPredicted RBP20.99■□□□□ 0.95
SNX27-202ENST00000368841 STAC3Q96MF2 364 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 DPH6Q7L8W6 267 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 ATP2C2O75185 946 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 CEBPAP49715 358 aaPredicted RBP20.99■□□□□ 0.95
SNX27-202ENST00000368841 NAIPQ13075 1403 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 PKNOX2Q96KN3 472 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 SHTN1A0MZ66 631 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 PICALMQ13492 652 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 CEP63Q96MT8 703 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 PODXL2Q9NZ53 605 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
SNX27-202ENST00000368841 CHRNA2Q15822 529 aa20.98■□□□□ 0.95
SNX27-202ENST00000368841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.98■□□□□ 0.95
SNX27-202ENST00000368841 INCENPQ9NQS7 918 aa20.98■□□□□ 0.95
SNX27-202ENST00000368841 ESPNB1AK53 854 aa20.98■□□□□ 0.95
SNX27-202ENST00000368841 FAM107BQ9H098 131 aa20.98■□□□□ 0.95
SNX27-202ENST00000368841 GIMAP7Q8NHV1 300 aa20.97■□□□□ 0.95
SNX27-202ENST00000368841 LMAN1P49257 510 aa20.97■□□□□ 0.95
SNX27-202ENST00000368841 GJC1P36383 396 aa20.97■□□□□ 0.95
SNX27-202ENST00000368841 KAT14Q9H8E8 782 aa20.97■□□□□ 0.95
SNX27-202ENST00000368841 VTI1AQ96AJ9 217 aa20.97■□□□□ 0.95
SNX27-202ENST00000368841 HOOK3Q86VS8 718 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 DNAAF4Q8WXU2 420 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 TMEM110-MUSTN1A8MSY1 372 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 SMC1AQ14683 1233 aaKnown RBP20.96■□□□□ 0.95
SNX27-202ENST00000368841 AFMP43652 599 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 AKNAD1Q5T1N1 836 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 MAATS1Q7Z4T9 603 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 KIF20AO95235 890 aa20.96■□□□□ 0.95
SNX27-202ENST00000368841 BAG4O95429 457 aaKnown RBP20.96■□□□□ 0.95
SNX27-202ENST00000368841 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 ZSCAN12O43309 604 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 ZNF830Q96NB3 372 aaPredicted RBP20.95■□□□□ 0.94
SNX27-202ENST00000368841 VPS36Q86VN1 386 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 NECAB1Q8N987 351 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 KCNH5Q8NCM2 988 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 CALML4Q96GE6 196 aa20.95■□□□□ 0.94
SNX27-202ENST00000368841 YEATS4O95619 227 aa20.94■□□□□ 0.94
SNX27-202ENST00000368841 SPECC1Q5M775 1068 aa20.94■□□□□ 0.94
SNX27-202ENST00000368841 PAIP2Q9BPZ3 127 aaKnown RBP20.94■□□□□ 0.94
SNX27-202ENST00000368841 JADE2Q9NQC1 790 aa20.93■□□□□ 0.94
SNX27-202ENST00000368841 CDK13Q14004 1512 aaKnown RBP20.93■□□□□ 0.94
SNX27-202ENST00000368841 JAG2Q9Y219 1238 aa20.93■□□□□ 0.94
SNX27-202ENST00000368841 ATAD2Q6PL18 1390 aa20.93■□□□□ 0.94
SNX27-202ENST00000368841 TNPO1Q92973 898 aaKnown RBP20.93■□□□□ 0.94
SNX27-202ENST00000368841 METAP2P50579 478 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNX27-202ENST00000368841 RARSP54136 660 aaKnown RBP20.93■□□□□ 0.94
SNX27-202ENST00000368841 ARL1P40616 181 aaPredicted RBP20.92■□□□□ 0.94
SNX27-202ENST00000368841 TCEANC2Q96MN5 208 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 CCDC196A0A1B0GTZ2 297 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 STAMBPO95630 424 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 RFC4P35249 363 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 LDHAL6AQ6ZMR3 332 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 FAM212AQ96EL1 285 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 EHMT1Q9H9B1 1298 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 NESP48681 1621 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 PLS1Q14651 629 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 DNAI2Q9GZS0 605 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 UBE3BQ7Z3V4 1068 aa20.92■□□□□ 0.94
SNX27-202ENST00000368841 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
SNX27-202ENST00000368841 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
SNX27-202ENST00000368841 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 RAB34Q9BZG1 259 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 GCOM1H8Y6P7 765 aaPredicted RBP20.91■□□□□ 0.94
SNX27-202ENST00000368841 MYZAPP0CAP1 466 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
SNX27-202ENST00000368841 MRPS9P82933 396 aaKnown RBP20.91■□□□□ 0.94
SNX27-202ENST00000368841 KIF18AQ8NI77 898 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 MFSD6Q6ZSS7 791 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 HEATR3Q7Z4Q2 680 aa20.91■□□□□ 0.94
SNX27-202ENST00000368841 RBM26Q5T8P6 1007 aaKnown RBP20.9■□□□□ 0.94
SNX27-202ENST00000368841 ADCY5O95622 1261 aa20.9■□□□□ 0.94
SNX27-202ENST00000368841 GTF2F1P35269 517 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX27-202ENST00000368841 CTR9Q6PD62 1173 aa20.9■□□□□ 0.94
SNX27-202ENST00000368841 HOMER2Q9NSB8 354 aa20.9■□□□□ 0.94
SNX27-202ENST00000368841 EXOC5O00471 708 aa20.9■□□□□ 0.94
SNX27-202ENST00000368841 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms