RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
CD48-202ENST00000368046 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
CD48-202ENST00000368046 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
CD48-202ENST00000368046 TGFB2P61812 414 aa12.88□□□□□ -0.35
CD48-202ENST00000368046 GPR162Q16538 588 aa12.88□□□□□ -0.35
CD48-202ENST00000368046 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
CD48-202ENST00000368046 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
CD48-202ENST00000368046 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
CD48-202ENST00000368046 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
CD48-202ENST00000368046 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
CD48-202ENST00000368046 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
CD48-202ENST00000368046 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
CD48-202ENST00000368046 NBPF10Q6P3W6 841 aaKnown RBP12.87□□□□□ -0.35
CD48-202ENST00000368046 DZIP3Q86Y13 1208 aaKnown RBP12.87□□□□□ -0.35
CD48-202ENST00000368046 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
CD48-202ENST00000368046 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
CD48-202ENST00000368046 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
CD48-202ENST00000368046 NFIXQ14938 502 aa12.86□□□□□ -0.35
CD48-202ENST00000368046 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
CD48-202ENST00000368046 SERPINB2P05120 415 aa12.85□□□□□ -0.35
CD48-202ENST00000368046 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
CD48-202ENST00000368046 DDR1Q08345 913 aa12.85□□□□□ -0.35
CD48-202ENST00000368046 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
CD48-202ENST00000368046 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 RGL2O15211 777 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 GRIN3BO60391 1043 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
CD48-202ENST00000368046 GNAI1P63096 354 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 TBC1D9BQ66K14 1250 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
CD48-202ENST00000368046 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
CD48-202ENST00000368046 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
CD48-202ENST00000368046 IFT57Q9NWB7 429 aa12.83□□□□□ -0.36
CD48-202ENST00000368046 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
CD48-202ENST00000368046 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
CD48-202ENST00000368046 MYL6BP14649 208 aa12.82□□□□□ -0.36
CD48-202ENST00000368046 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
CD48-202ENST00000368046 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
CD48-202ENST00000368046 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
CD48-202ENST00000368046 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
CD48-202ENST00000368046 HOXB7P09629 217 aa12.81□□□□□ -0.36
CD48-202ENST00000368046 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
CD48-202ENST00000368046 KCNA3P22001 575 aa12.81□□□□□ -0.36
CD48-202ENST00000368046 PDIA6Q15084 440 aa12.81□□□□□ -0.36
CD48-202ENST00000368046 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
CD48-202ENST00000368046 DPEP1P16444 411 aa12.8□□□□□ -0.36
CD48-202ENST00000368046 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
CD48-202ENST00000368046 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 YY1P25490 414 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 HLFQ16534 295 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
CD48-202ENST00000368046 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
CD48-202ENST00000368046 PRR5LQ6MZQ0 368 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 WDR63Q8IWG1 891 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
CD48-202ENST00000368046 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
CD48-202ENST00000368046 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
CD48-202ENST00000368046 IL16Q14005 1332 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
CD48-202ENST00000368046 H0YIN7 160 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.37
CD48-202ENST00000368046 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 CHRNA5P30532 468 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 PDE6BP35913 854 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
CD48-202ENST00000368046 COPS6Q7L5N1 327 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
CD48-202ENST00000368046 UTRNP46939 3433 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 NPHP1O15259 732 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 ANXA1P04083 346 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 AIMP1Q12904 312 aaKnown RBP12.76□□□□□ -0.37
CD48-202ENST00000368046 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
CD48-202ENST00000368046 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 C8orf58Q8NAV2 365 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
CD48-202ENST00000368046 ST5P78524 1137 aa12.75□□□□□ -0.37
CD48-202ENST00000368046 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
CD48-202ENST00000368046 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
CD48-202ENST00000368046 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
CD48-202ENST00000368046 XAGE3Q8WTP9 111 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms