RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
EDC4-201ENST00000358933 CCDC102BQ68D86 513 aa23.57■■□□□ 1.36
EDC4-201ENST00000358933 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.364e-7■■□□□ 11.8
EDC4-201ENST00000358933 KDM2BQ8NHM5 1336 aa23.57■■□□□ 1.36
EDC4-201ENST00000358933 RIOK3O14730 519 aaKnown RBP23.57■■□□□ 1.36
EDC4-201ENST00000358933 PDE1AP54750 535 aa23.57■■□□□ 1.36
EDC4-201ENST00000358933 HLTFQ14527 1009 aaKnown RBP eCLIP23.57■■□□□ 1.36
EDC4-201ENST00000358933 ABCC5O15440 1437 aa23.57■■□□□ 1.36
EDC4-201ENST00000358933 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
EDC4-201ENST00000358933 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 TDO2P48775 406 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 TUBB4BP68371 445 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 CACNA2D4Q7Z3S7 1137 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 EHBP1Q8NDI1 1231 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 HMG20BQ9P0W2 317 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 CEP112Q8N8E3 955 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 SYTL4Q96C24 671 aaPredicted RBP23.56■■□□□ 1.36
EDC4-201ENST00000358933 ALS2CR12Q96Q35 445 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
EDC4-201ENST00000358933 NPHP3Q7Z494 1330 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 EBAG9O00559 213 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 SYT1P21579 422 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 GBP2P32456 591 aaPredicted RBP23.56■■□□□ 1.36
EDC4-201ENST00000358933 PLCD3Q8N3E9 789 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 AOPEPQ8N6M6 819 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 NECAB1Q8N987 351 aa23.56■■□□□ 1.36
EDC4-201ENST00000358933 ISM2Q6H9L7 571 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 RLBP1P12271 317 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 CKAP4Q07065 602 aaKnown RBP23.55■■□□□ 1.36
EDC4-201ENST00000358933 CCDC196A0A1B0GTZ2 297 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 GNAT3A8MTJ3 354 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 MYL6BP14649 208 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 HSPA4P34932 840 aa23.55■■□□□ 1.36
EDC4-201ENST00000358933 CCDC8Q9H0W5 538 aaPredicted RBP23.55■■□□□ 1.36
EDC4-201ENST00000358933 GTF3C6Q969F1 213 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.54■■□□□ 1.362e-6■■■■■ 70.5
EDC4-201ENST00000358933 SEPT11Q9NVA2 429 aaKnown RBP23.54■■□□□ 1.36
EDC4-201ENST00000358933 ANKRD44Q8N8A2 993 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 NEK1Q96PY6 1258 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 HSF2BPO75031 334 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 SSBP05455 408 aaKnown RBP eCLIP23.54■■□□□ 1.36
EDC4-201ENST00000358933 SPECC1LQ69YQ0 1117 aa23.54■■□□□ 1.36
EDC4-201ENST00000358933 GNL3LQ9NVN8 582 aaKnown RBP23.54■■□□□ 1.36
EDC4-201ENST00000358933 SYT10Q6XYQ8 523 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 MAATS1Q7Z4T9 603 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 TXNDC2Q86VQ3 553 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 JADE2Q9NQC1 790 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 VPS18Q9P253 973 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 EPRSP07814 1512 aaKnown RBP23.53■■□□□ 1.36
EDC4-201ENST00000358933 GOLGA8BA8MQT2 603 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 KIF6Q6ZMV9 814 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 GCOM1H8Y6P7 765 aaPredicted RBP23.53■■□□□ 1.36
EDC4-201ENST00000358933 MYZAPP0CAP1 466 aa23.53■■□□□ 1.36
EDC4-201ENST00000358933 BTBD11A6QL63 1104 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 DNA2P51530 1060 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
EDC4-201ENST00000358933 CCDC178Q5BJE1 867 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 MRPS27Q92552 414 aaKnown RBP23.52■■□□□ 1.36
EDC4-201ENST00000358933 NBPF11Q86T75 865 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 RNF216Q9NWF9 866 aaPredicted RBP23.52■■□□□ 1.36
EDC4-201ENST00000358933 FLIIQ13045 1269 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 KANK3Q6NY19 840 aa23.52■■□□□ 1.36
EDC4-201ENST00000358933 POLR3DP05423 398 aaPredicted RBP23.51■■□□□ 1.35
EDC4-201ENST00000358933 TUBBP07437 444 aa23.51■■□□□ 1.35
EDC4-201ENST00000358933 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
EDC4-201ENST00000358933 ORC3Q9UBD5 711 aaPredicted RBP23.51■■□□□ 1.35
EDC4-201ENST00000358933 SYKP43405 635 aa23.51■■□□□ 1.35
EDC4-201ENST00000358933 GIGYF2Q6Y7W6 1299 aaKnown RBP23.51■■□□□ 1.35
EDC4-201ENST00000358933 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
EDC4-201ENST00000358933 TNNQ9UQP3 1299 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 NSD2O96028 1365 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 A0A1B0GUL7 405 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 AIDAQ96BJ3 306 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 IDH1O75874 414 aaKnown RBP23.5■■□□□ 1.35
EDC4-201ENST00000358933 TDRD12Q587J7 1177 aaKnown RBP23.5■■□□□ 1.35
EDC4-201ENST00000358933 KCNG4Q8TDN1 519 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 VPS36Q86VN1 386 aa23.5■■□□□ 1.35
EDC4-201ENST00000358933 OPA1O60313 960 aa23.49■■□□□ 1.35
EDC4-201ENST00000358933 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
EDC4-201ENST00000358933 IKQ13123 557 aaPredicted RBP23.49■■□□□ 1.35
EDC4-201ENST00000358933 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
EDC4-201ENST00000358933 ZNF500O60304 480 aaPredicted RBP23.49■■□□□ 1.35
EDC4-201ENST00000358933 KRBA2Q6ZNG9 492 aa23.49■■□□□ 1.35
EDC4-201ENST00000358933 N4BP3O15049 544 aa23.49■■□□□ 1.35
EDC4-201ENST00000358933 FGFR1OPO95684 399 aaKnown RBP23.49■■□□□ 1.35
EDC4-201ENST00000358933 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.49■■□□□ 1.35
EDC4-201ENST00000358933 MATR3P43243 847 aaKnown RBP eCLIP23.48■■□□□ 1.35
EDC4-201ENST00000358933 PPP1R9BQ96SB3 815 aa23.48■■□□□ 1.35
EDC4-201ENST00000358933 USP26Q9BXU7 913 aa23.48■■□□□ 1.35
EDC4-201ENST00000358933 SCAF11Q99590 1463 aaKnown RBP23.48■■□□□ 1.35
EDC4-201ENST00000358933 CCDC91Q7Z6B0 441 aa23.48■■□□□ 1.35
EDC4-201ENST00000358933 GOPCQ9HD26 462 aa23.48■■□□□ 1.35
EDC4-201ENST00000358933 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
EDC4-201ENST00000358933 IFIT1P09914 478 aaKnown RBP23.48■■□□□ 1.35
EDC4-201ENST00000358933 OTUD6BQ8N6M0 293 aa23.47■■□□□ 1.35
EDC4-201ENST00000358933 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
EDC4-201ENST00000358933 CTAGE9A4FU28 777 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms