RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 SH3PXD2AQ5TCZ1 1133 aa10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 C1orf216Q8TAB5 229 aa10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 SCG3Q8WXD2 468 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 ZNF775Q96BV0 537 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-204ENST00000349311 FOXO3O43524 673 aa10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 F11P03951 625 aa10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 CRISPLD1Q9H336 500 aa10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 CUEDC1Q9NWM3 386 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-204ENST00000349311 ERCC6Q03468 1493 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 SERTM1A2A2V5 107 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 LGR5O75473 907 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 MSX1P28360 303 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 LCE2CQ5TA81 110 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 GMCL1Q96IK5 515 aa10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 CXXC1Q9P0U4 656 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-204ENST00000349311 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 CSB-PGBD3P0DP91 1061 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 TXLNAP40222 546 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 UBAP2LQ14157 1087 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 RETREG2Q8NC44 543 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
UBE2D3-204ENST00000349311 IGF1RP08069 1367 aa10.94□□□□□ -0.66
UBE2D3-204ENST00000349311 DBN1Q16643 649 aa10.94□□□□□ -0.66
UBE2D3-204ENST00000349311 RAPGEF2Q9Y4G8 1499 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 TRIM22Q8IYM9 498 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 COL26A1Q96A83 441 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 GPC6Q9Y625 555 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-204ENST00000349311 PRMT3O60678 531 aa10.92□□□□□ -0.66
UBE2D3-204ENST00000349311 SSFA2P28290 1259 aa10.92□□□□□ -0.66
UBE2D3-204ENST00000349311 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
UBE2D3-204ENST00000349311 NBPF1Q3BBV0 1214 aa10.91□□□□□ -0.66
UBE2D3-204ENST00000349311 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-204ENST00000349311 ZIC5Q96T25 663 aa10.91□□□□□ -0.66
UBE2D3-204ENST00000349311 GAS2L1Q99501 681 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-204ENST00000349311 VEGFBP49765 207 aa10.9□□□□□ -0.66
UBE2D3-204ENST00000349311 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
UBE2D3-204ENST00000349311 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
UBE2D3-204ENST00000349311 H7C1W4 665 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 TREML4Q6UXN2 200 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 AIDAQ96BJ3 306 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 MYO19Q96H55 970 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 PHACTR1Q9C0D0 580 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
UBE2D3-204ENST00000349311 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 NLRP8Q86W28 1048 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 GPR161Q8N6U8 529 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 RUBCNLQ9H714 662 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 QTRT2Q9H974 415 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
UBE2D3-204ENST00000349311 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-204ENST00000349311 GPAMQ9HCL2 828 aa10.87□□□□□ -0.67
UBE2D3-204ENST00000349311 NDFIP2Q9NV92 336 aa10.87□□□□□ -0.67
UBE2D3-204ENST00000349311 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 A0A1W2PNR3 127 aa10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 TATP17735 454 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 PDE4CQ08493 712 aa10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 VWA5B2Q8N398 1253 aa10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-204ENST00000349311 RTN1Q16799 776 aa10.85□□□□□ -0.67
UBE2D3-204ENST00000349311 RIPOR1Q6ZS17 1223 aa10.85□□□□□ -0.67
UBE2D3-204ENST00000349311 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
UBE2D3-204ENST00000349311 SV2AQ7L0J3 742 aa10.85□□□□□ -0.67
UBE2D3-204ENST00000349311 GRIN2BQ13224 1484 aa10.85□□□□□ -0.67
UBE2D3-204ENST00000349311 WFS1O76024 890 aa10.84□□□□□ -0.67
UBE2D3-204ENST00000349311 SAMD5Q5TGI4 173 aa10.84□□□□□ -0.67
UBE2D3-204ENST00000349311 IRF7Q92985 503 aa10.84□□□□□ -0.67
UBE2D3-204ENST00000349311 LRFN2Q9ULH4 789 aa10.84□□□□□ -0.67
UBE2D3-204ENST00000349311 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-204ENST00000349311 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
UBE2D3-204ENST00000349311 HCN2Q9UL51 889 aa10.83□□□□□ -0.68
UBE2D3-204ENST00000349311 EFHC2Q5JST6 749 aa10.82□□□□□ -0.68
UBE2D3-204ENST00000349311 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
UBE2D3-204ENST00000349311 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
UBE2D3-204ENST00000349311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.82□□□□□ -0.681e-7■■■■■ 61.1
UBE2D3-204ENST00000349311 BCS1LQ9Y276 419 aa10.82□□□□□ -0.68
UBE2D3-204ENST00000349311 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 COX20Q5RI15 118 aa10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 SUSD3Q96L08 255 aa10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 ZCCHC2Q9C0B9 1178 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 DMGDHQ9UI17 866 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-204ENST00000349311 FHAD1B1AJZ9 1412 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms