RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 MYRIPQ8NFW9 859 aa20.17■□□□□ 0.82
SPAST-202ENST00000345662 IKQ13123 557 aaPredicted RBP20.17■□□□□ 0.82
SPAST-202ENST00000345662 CACNA2D4Q7Z3S7 1137 aa20.17■□□□□ 0.82
SPAST-202ENST00000345662 SCAF11Q99590 1463 aaKnown RBP20.17■□□□□ 0.82
SPAST-202ENST00000345662 CCDC196A0A1B0GTZ2 297 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 CTAGE15A4D2H0 777 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 SSBP05455 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPAST-202ENST00000345662 CTAGE8P0CG41 777 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 EZRP15311 586 aaKnown RBP20.16■□□□□ 0.82
SPAST-202ENST00000345662 LIG1P18858 919 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 CTAGE6Q86UF2 777 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 CTAGE4Q8IX94 777 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 PDE1AP54750 535 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 CCDC102BQ68D86 513 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
SPAST-202ENST00000345662 BCCIPQ9P287 314 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPAST-202ENST00000345662 ALS2CR12Q96Q35 445 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
SPAST-202ENST00000345662 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
SPAST-202ENST00000345662 GOLGA8BA8MQT2 603 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 GBP2P32456 591 aaPredicted RBP20.15■□□□□ 0.82
SPAST-202ENST00000345662 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 INTS4Q96HW7 963 aaKnown RBP20.15■□□□□ 0.82
SPAST-202ENST00000345662 TATP17735 454 aaPredicted RBP20.15■□□□□ 0.82
SPAST-202ENST00000345662 NECAB1Q8N987 351 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 FLIIQ13045 1269 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
SPAST-202ENST00000345662 ISM2Q6H9L7 571 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 MBIPQ9NS73 344 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 IDH1O75874 414 aaKnown RBP20.15■□□□□ 0.82
SPAST-202ENST00000345662 EHBP1Q8NDI1 1231 aa20.15■□□□□ 0.82
SPAST-202ENST00000345662 SPECC1Q5M775 1068 aa20.14■□□□□ 0.82
SPAST-202ENST00000345662 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.82
SPAST-202ENST00000345662 RALGAPBQ86X10 1494 aa20.14■□□□□ 0.82
SPAST-202ENST00000345662 ZNF445P59923 1031 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
SPAST-202ENST00000345662 GOLGA1Q92805 767 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 KDM2BQ8NHM5 1336 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 GOLGA6L10A0A0M3HER8 536 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 AOPEPQ8N6M6 819 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 ANKRD44Q8N8A2 993 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 RASSF4Q9H2L5 321 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 PIBF1Q8WXW3 757 aa20.14■□□□□ 0.81
SPAST-202ENST00000345662 NF2P35240 595 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 RLBP1P12271 317 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 SYT1P21579 422 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 GABPB1Q06547 395 aaPredicted RBP20.13■□□□□ 0.81
SPAST-202ENST00000345662 CKAP4Q07065 602 aaKnown RBP20.13■□□□□ 0.81
SPAST-202ENST00000345662 TTC31Q49AM3 519 aaPredicted RBP20.13■□□□□ 0.81
SPAST-202ENST00000345662 CEP112Q8N8E3 955 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 POLR3DP05423 398 aaPredicted RBP20.13■□□□□ 0.81
SPAST-202ENST00000345662 KANK3Q6NY19 840 aa20.13■□□□□ 0.81
SPAST-202ENST00000345662 IFIT1P09914 478 aaKnown RBP20.12■□□□□ 0.81
SPAST-202ENST00000345662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.81
SPAST-202ENST00000345662 GCOM1H8Y6P7 765 aaPredicted RBP20.12■□□□□ 0.81
SPAST-202ENST00000345662 MYZAPP0CAP1 466 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 DNA2P51530 1060 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 JADE2Q9NQC1 790 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 HSF2BPO75031 334 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 ERO1AQ96HE7 468 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 LARP1Q6PKG0 1096 aaKnown RBP20.12■□□□□ 0.81
SPAST-202ENST00000345662 MAATS1Q7Z4T9 603 aa20.12■□□□□ 0.81
SPAST-202ENST00000345662 MRPS27Q92552 414 aaKnown RBP20.12■□□□□ 0.81
SPAST-202ENST00000345662 TUBB4BP68371 445 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 MICALL1Q8N3F8 863 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 ORC3Q9UBD5 711 aaPredicted RBP20.11■□□□□ 0.81
SPAST-202ENST00000345662 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 NPHP3Q7Z494 1330 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 CABP4P57796 275 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 VPS36Q86VN1 386 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 C10orf67Q8IYJ2 551 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 FGFR1OPO95684 399 aaKnown RBP20.11■□□□□ 0.81
SPAST-202ENST00000345662 SYKP43405 635 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 USP16Q9Y5T5 823 aa20.11■□□□□ 0.81
SPAST-202ENST00000345662 ZNF213O14771 459 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 TDRD12Q587J7 1177 aaKnown RBP20.1■□□□□ 0.81
SPAST-202ENST00000345662 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
SPAST-202ENST00000345662 SPECC1LQ69YQ0 1117 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 KCNG4Q8TDN1 519 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 AKAP2Q9Y2D5 859 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 SSRP1Q08945 709 aaKnown RBP20.1■□□□□ 0.81
SPAST-202ENST00000345662 EMILIN1Q9Y6C2 1016 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 HSPA4P34932 840 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
SPAST-202ENST00000345662 U2AF2P26368 475 aaKnown RBP eCLIP20.09■□□□□ 0.81
SPAST-202ENST00000345662 SYT10Q6XYQ8 523 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 GIGYF2Q6Y7W6 1299 aaKnown RBP20.09■□□□□ 0.81
SPAST-202ENST00000345662 PPP1R42Q7Z4L9 355 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 MPHOSPH8Q99549 860 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 TSG101Q99816 390 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 SLC12A7Q9Y666 1083 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 VPS18Q9P253 973 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
SPAST-202ENST00000345662 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms