RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TMCO3Q6UWJ1 677 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 TCP11L1Q9NUJ3 509 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
COL11A2-201ENST00000341947 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 IFFO1Q0D2I5 559 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 MACROD2A1Z1Q3 448 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 KIF4BQ2VIQ3 1234 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 LIMCH1Q9UPQ0 1083 aa17.6■□□□□ 0.41
COL11A2-201ENST00000341947 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
COL11A2-201ENST00000341947 MYZAPP0CAP1 466 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 NESP48681 1621 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 MTIF2P46199 727 aaKnown RBP17.59■□□□□ 0.41
COL11A2-201ENST00000341947 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
COL11A2-201ENST00000341947 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
COL11A2-201ENST00000341947 ST5P78524 1137 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 IFNL2Q8IZJ0 200 aa17.59■□□□□ 0.41
COL11A2-201ENST00000341947 SHTN1A0MZ66 631 aa17.58■□□□□ 0.41
COL11A2-201ENST00000341947 MYO1BO43795 1136 aa17.58■□□□□ 0.41
COL11A2-201ENST00000341947 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.41
COL11A2-201ENST00000341947 TSPY2A6NKD2 308 aa17.58■□□□□ 0.41
COL11A2-201ENST00000341947 PAFAH1B1P43034 410 aa17.58■□□□□ 0.41
COL11A2-201ENST00000341947 CCT2P78371 535 aaKnown RBP17.58■□□□□ 0.41
COL11A2-201ENST00000341947 PYM1Q9BRP8 204 aaKnown RBP17.58■□□□□ 0.41
COL11A2-201ENST00000341947 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.41
COL11A2-201ENST00000341947 TOPBP1Q92547 1522 aa17.58■□□□□ 0.4
COL11A2-201ENST00000341947 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
COL11A2-201ENST00000341947 NAIPQ13075 1403 aa17.58■□□□□ 0.4
COL11A2-201ENST00000341947 GOLIM4O00461 696 aa17.58■□□□□ 0.4
COL11A2-201ENST00000341947 GSTO1P78417 241 aa17.58■□□□□ 0.4
COL11A2-201ENST00000341947 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
COL11A2-201ENST00000341947 RFC4P35249 363 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 DNA2P51530 1060 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL11A2-201ENST00000341947 FAM114A1Q8IWE2 563 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 VAT1LQ9HCJ6 419 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 GOLGA6L10A0A0M3HER8 536 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 ALS2CR12Q96Q35 445 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
COL11A2-201ENST00000341947 SYCP3Q8IZU3 236 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 FSIP1Q8NA03 581 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 COMMD10Q9Y6G5 202 aa17.57■□□□□ 0.4
COL11A2-201ENST00000341947 FLIIQ13045 1269 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 TCERG1LQ5VWI1 586 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 ECHDC1Q9NTX5 307 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
COL11A2-201ENST00000341947 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
COL11A2-201ENST00000341947 TNNT1P13805 278 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 CPLX3Q8WVH0 158 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 IDEP14735 1019 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
COL11A2-201ENST00000341947 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
COL11A2-201ENST00000341947 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
COL11A2-201ENST00000341947 CCDC144CPQ8IYA2 1237 aa17.55■□□□□ 0.4
COL11A2-201ENST00000341947 DDX19AQ9NUU7 478 aaKnown RBP17.55■□□□□ 0.4
COL11A2-201ENST00000341947 PRC1O43663 620 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 ESPNB1AK53 854 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 NF2P35240 595 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 METAP2P50579 478 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL11A2-201ENST00000341947 FERMT1Q9BQL6 677 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 TRMT1LQ7Z2T5 733 aaKnown RBP17.54■□□□□ 0.4
COL11A2-201ENST00000341947 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 PIK3R4Q99570 1358 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 ADGRL1O94910 1474 aa17.54■□□□□ 0.4
COL11A2-201ENST00000341947 NAA15Q9BXJ9 866 aaKnown RBP17.53■□□□□ 0.4
COL11A2-201ENST00000341947 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
COL11A2-201ENST00000341947 TMCO5BA8MYB1 307 aa17.53■□□□□ 0.4
COL11A2-201ENST00000341947 BICD1Q96G01 975 aa17.53■□□□□ 0.4
COL11A2-201ENST00000341947 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
COL11A2-201ENST00000341947 GJB2P29033 226 aa17.53■□□□□ 0.4
COL11A2-201ENST00000341947 KANK3Q6NY19 840 aa17.53■□□□□ 0.4
COL11A2-201ENST00000341947 PUF60Q9UHX1 559 aaKnown RBP17.53■□□□□ 0.4
COL11A2-201ENST00000341947 PABPN1LA6NDY0 278 aaKnown RBP17.52■□□□□ 0.4
COL11A2-201ENST00000341947 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 TBCAO75347 108 aaKnown RBP17.52■□□□□ 0.4
COL11A2-201ENST00000341947 STX1AQ16623 288 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL11A2-201ENST00000341947 UBA7P41226 1012 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 SNRKQ9NRH2 765 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 CAMSAP2Q08AD1 1489 aa17.52■□□□□ 0.4
COL11A2-201ENST00000341947 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms