RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 LIG1P18858 919 aa16.33■□□□□ 0.2
FNDC1-202ENST00000329629 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 MSH6P52701 1360 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
FNDC1-202ENST00000329629 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
FNDC1-202ENST00000329629 MCM10Q7L590 875 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
FNDC1-202ENST00000329629 ATP2C2O75185 946 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
FNDC1-202ENST00000329629 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 ISM2Q6H9L7 571 aa16.31■□□□□ 0.2
FNDC1-202ENST00000329629 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
FNDC1-202ENST00000329629 HOOK3Q86VS8 718 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
FNDC1-202ENST00000329629 ALS2CR12Q96Q35 445 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 CTAGE5O15320 804 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 TOM1O60784 492 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
FNDC1-202ENST00000329629 PRPF4BQ13523 1007 aaKnown RBP16.29■□□□□ 0.2
FNDC1-202ENST00000329629 C20orf194Q5TEA3 1177 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
FNDC1-202ENST00000329629 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
FNDC1-202ENST00000329629 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-202ENST00000329629 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-202ENST00000329629 DUSP27Q5VZP5 1158 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 STX1AQ16623 288 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 NEMFO60524 1076 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 GSDMDP57764 484 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 NCOA1Q15788 1441 aa16.29■□□□□ 0.2
FNDC1-202ENST00000329629 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
FNDC1-202ENST00000329629 GJB2P29033 226 aa16.28■□□□□ 0.2
FNDC1-202ENST00000329629 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
FNDC1-202ENST00000329629 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
FNDC1-202ENST00000329629 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
FNDC1-202ENST00000329629 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
FNDC1-202ENST00000329629 GLRX3O76003 335 aaKnown RBP16.28■□□□□ 0.2
FNDC1-202ENST00000329629 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
FNDC1-202ENST00000329629 CTNNA2P26232 953 aa16.28■□□□□ 0.2
FNDC1-202ENST00000329629 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
FNDC1-202ENST00000329629 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
FNDC1-202ENST00000329629 TRIM21P19474 475 aaKnown RBP16.27■□□□□ 0.2
FNDC1-202ENST00000329629 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
FNDC1-202ENST00000329629 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
FNDC1-202ENST00000329629 JADE2Q9NQC1 790 aa16.27■□□□□ 0.2
FNDC1-202ENST00000329629 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
FNDC1-202ENST00000329629 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
FNDC1-202ENST00000329629 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.19
FNDC1-202ENST00000329629 MNAT1P51948 309 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 TNIP1Q15025 636 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.19
FNDC1-202ENST00000329629 PPM1EQ8WY54 764 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 ZNF830Q96NB3 372 aaPredicted RBP16.27■□□□□ 0.19
FNDC1-202ENST00000329629 MYD88Q99836 296 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.19
FNDC1-202ENST00000329629 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 CHMP4BP1P59074 171 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 SPTY2D1Q68D10 685 aaPredicted RBP16.27■□□□□ 0.19
FNDC1-202ENST00000329629 SPECC1LQ69YQ0 1117 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.19
FNDC1-202ENST00000329629 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
FNDC1-202ENST00000329629 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
FNDC1-202ENST00000329629 SCLT1Q96NL6 688 aa16.26■□□□□ 0.19
FNDC1-202ENST00000329629 MKNK2Q9HBH9 465 aa16.26■□□□□ 0.19
FNDC1-202ENST00000329629 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
FNDC1-202ENST00000329629 NAPBQ9H115 298 aa16.26■□□□□ 0.19
FNDC1-202ENST00000329629 CCDC8Q9H0W5 538 aaPredicted RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 DYNC1I1O14576 645 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 HSF2BPO75031 334 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 TIGD1Q96MW7 591 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 NLRP5P59047 1200 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
FNDC1-202ENST00000329629 GNG11P61952 73 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
FNDC1-202ENST00000329629 CCDC144CPQ8IYA2 1237 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms