RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 IGSF3O75054 1194 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 CCT4P50991 539 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 STK3Q13188 491 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 AP1ARQ63HQ0 302 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 JAKMIP1Q96N16 626 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 SUDS3Q9H7L9 328 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 PRG4Q92954 1404 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 NEBLO76041 1014 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 ARHGAP25P42331 645 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 BLOC1S2Q6QNY1 142 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 STMN4Q9H169 189 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 TIAM1Q13009 1591 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 PAFAH1B1P43034 410 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 MTHFSP49914 203 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 STAC3Q96MF2 364 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 WDR78Q5VTH9 848 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 A6NNZ2 444 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 RAB3GAP1Q15042 981 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 TUBB8Q3ZCM7 444 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 SNX21Q969T3 373 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 KRT18P05783 430 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 ZHX3Q9H4I2 956 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 USO1O60763 962 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 PIBF1Q8WXW3 757 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 PRAM1Q96QH2 718 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 CTAGE9A4FU28 777 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 STX6O43752 255 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 TTC14Q96N46 770 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF830Q96NB3 372 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 EXOSC9Q06265 439 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 VPS36Q86VN1 386 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 SLFN5Q08AF3 891 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 AFAP1L1Q8TED9 768 aa6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC85AQ96PX6 553 aaPredicted RBP6.18□□□□□ -1.42
SDR42E1-201ENST00000328945 STAMBPO95630 424 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 INPP5BP32019 993 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SH3BGRP55822 239 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC6Q16204 474 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 DAAM2Q86T65 1068 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SMC5Q8IY18 1101 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 NCOA2Q15596 1464 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 WASF1Q92558 559 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 TTC12Q9H892 705 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 MX1P20591 662 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 C20orf194Q5TEA3 1177 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 TAOK3Q9H2K8 898 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SEPT11Q9NVA2 429 aaKnown RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 FERMT3Q86UX7 667 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 EHBP1L1Q8N3D4 1523 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 GAS2L2Q8NHY3 880 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 WDR70Q9NW82 654 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 DNAI1Q9UI46 699 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 ERBINQ96RT1 1412 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SDK1Q7Z5N4 2213 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 BUB1BO60566 1050 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 FAM184BQ9ULE4 1060 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 LIMCH1Q9UPQ0 1083 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SPG7Q9UQ90 795 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 ZNF644Q9H582 1327 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC186Q7Z3E2 898 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 AFAP1Q8N556 730 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 CASKIN1Q8WXD9 1431 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 ZFYP08048 801 aaPredicted RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 HLTFQ14527 1009 aaKnown RBP eCLIP6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC178Q5BJE1 867 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 CFAP57Q96MR6 1250 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 TANGO6Q9C0B7 1094 aa6.17□□□□□ -1.42
SDR42E1-201ENST00000328945 SURF6O75683 361 aaKnown RBP6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 LMNTD2Q8IXW0 634 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 ATRIPQ8WXE1 791 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 ATP2C2O75185 946 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 LACTBP83111 547 aaPredicted RBP6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 TSNAXIP1Q2TAA8 658 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 RPAINQ86UA6 219 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 CEP131Q9UPN4 1083 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 FKBP15Q5T1M5 1219 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 CDK19Q9BWU1 502 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 SYNJ2O15056 1496 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 GOPCQ9HD26 462 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 CCDC30Q5VVM6 783 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 TSR2Q969E8 191 aaKnown RBP6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 TMX1Q9H3N1 280 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 NESP48681 1621 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 NCOA1Q15788 1441 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 UBAP1LF5GYI3 381 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 U2AF2P26368 475 aaKnown RBP eCLIP6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 ARAP1Q96P48 1450 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 KIF3CO14782 793 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 IFT74Q96LB3 600 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 ANKRD12Q6UB98 2062 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 SPECC1Q5M775 1068 aa6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.16□□□□□ -1.42
SDR42E1-201ENST00000328945 MRC2Q9UBG0 1479 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms