RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
PPP3CA-201ENST00000323055 XBP1P17861 261 aa20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 DDX21Q9NR30 783 aaKnown RBP eCLIP20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 SYCE3A1L190 88 aa20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 KCNQ3O43525 872 aa20.17■□□□□ 0.82
PPP3CA-201ENST00000323055 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
PPP3CA-201ENST00000323055 TRIM5Q9C035 493 aa20.16■□□□□ 0.82
PPP3CA-201ENST00000323055 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
PPP3CA-201ENST00000323055 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 TMX3Q96JJ7 454 aa20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 NBPF7P0C2Y1 421 aaPredicted RBP20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 HAND2P61296 217 aa20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 HOOK1Q9UJC3 728 aaKnown RBP20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 ZPR1O75312 459 aa20.15■□□□□ 0.82
PPP3CA-201ENST00000323055 GUCY1B3Q02153 619 aa20.14■□□□□ 0.82
PPP3CA-201ENST00000323055 ARAP3Q8WWN8 1544 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 TRIM22Q8IYM9 498 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 TNMDQ9H2S6 317 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 KLHDC4Q8TBB5 520 aa20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 BICC1Q9H694 974 aaKnown RBP20.14■□□□□ 0.81
PPP3CA-201ENST00000323055 CCT2P78371 535 aaKnown RBP20.13■□□□□ 0.81
PPP3CA-201ENST00000323055 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
PPP3CA-201ENST00000323055 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
PPP3CA-201ENST00000323055 CCDC82Q8N4S0 544 aa20.13■□□□□ 0.81
PPP3CA-201ENST00000323055 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
PPP3CA-201ENST00000323055 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 UNC13BO14795 1591 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 TRPM1Q7Z4N2 1603 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 BAG4O95429 457 aaKnown RBP20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 SH2B1Q9NRF2 756 aaPredicted RBP20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 SPC24Q8NBT2 197 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 NAPBQ9H115 298 aa20.12■□□□□ 0.81
PPP3CA-201ENST00000323055 NECAB1Q8N987 351 aa20.11■□□□□ 0.81
PPP3CA-201ENST00000323055 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
PPP3CA-201ENST00000323055 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
PPP3CA-201ENST00000323055 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
PPP3CA-201ENST00000323055 LRRC2Q9BYS8 371 aa20.11■□□□□ 0.81
PPP3CA-201ENST00000323055 CCDC192P0DO97 292 aa20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 MAP3K12Q12852 859 aa20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 RAB11FIP4Q86YS3 637 aa20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 TFIP11Q9UBB9 837 aaKnown RBP20.1■□□□□ 0.81
PPP3CA-201ENST00000323055 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 ZNF213O14771 459 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 DDB1Q16531 1140 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 CAMK4Q16566 473 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 CROCC2H7BZ55 1655 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 SLC5A1P13866 664 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 CHMLP26374 656 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 TPM3P06753 285 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
PPP3CA-201ENST00000323055 A1BGP04217 495 aa20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 NAT10Q9H0A0 1025 aaKnown RBP20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 IQSEC3Q9UPP2 1182 aaPredicted RBP20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 GJB2P29033 226 aa20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 ATP6V1AP38606 617 aa20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 RNF17Q9BXT8 1623 aaKnown RBP20.08■□□□□ 0.81
PPP3CA-201ENST00000323055 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
PPP3CA-201ENST00000323055 CCDC173Q0VFZ6 552 aa20.08■□□□□ 0.8
PPP3CA-201ENST00000323055 BABAM1Q9NWV8 329 aa20.08■□□□□ 0.8
PPP3CA-201ENST00000323055 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.8
PPP3CA-201ENST00000323055 TSR1Q2NL82 804 aaKnown RBP20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 NEK1Q96PY6 1258 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 ABCC4O15439 1325 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 USP26Q9BXU7 913 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 NUP62CLQ9H1M0 184 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 UBAP1LF5GYI3 381 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 TPM1P09493 284 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 TFCP2Q12800 502 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 SLC52A2Q9HAB3 445 aa20.07■□□□□ 0.8
PPP3CA-201ENST00000323055 STX6O43752 255 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 NMIQ13287 307 aaPredicted RBP20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 OLFM4Q6UX06 510 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 HOMER1Q86YM7 354 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 PCMTD1Q96MG8 357 aaPredicted RBP20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 JMYQ8N9B5 988 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 ANKIB1Q9P2G1 1089 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 ZGPATQ8N5A5 531 aaKnown RBP20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 HELBQ8NG08 1087 aaPredicted RBP20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 SNX21Q969T3 373 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
PPP3CA-201ENST00000323055 HOXB7P09629 217 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms