RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 RAB27AP51159 221 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 MIPOL1Q8TD10 442 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 NEMFO60524 1076 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 SFSWAPQ12872 951 aaKnown RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 SPATA21Q7Z572 469 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 UBXN4Q92575 508 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 KIF9Q9HAQ2 790 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 UTP6Q9NYH9 597 aaKnown RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
BDNF-201ENST00000314915 LMCD1Q9NZU5 365 aa10.83□□□□□ -0.68
BDNF-201ENST00000314915 ZSCAN9O15535 394 aaPredicted RBP10.82□□□□□ -0.68
BDNF-201ENST00000314915 ALDH1B1P30837 517 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 CDR1P51861 262 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 SLC8A3P57103 927 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 CCDC181Q5TID7 509 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 RCSD1Q6JBY9 416 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 SNRNP27Q8WVK2 155 aaKnown RBP10.82□□□□□ -0.68
BDNF-201ENST00000314915 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 SYNRGQ9UMZ2 1314 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 RTN3O95197 1032 aaPredicted RBP10.82□□□□□ -0.68
BDNF-201ENST00000314915 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 NME8Q8N427 588 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 SPC24Q8NBT2 197 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 PARD3BQ8TEW8 1205 aa10.82□□□□□ -0.68
BDNF-201ENST00000314915 EME2A4GXA9 379 aaPredicted RBP10.81□□□□□ -0.68
BDNF-201ENST00000314915 TMED1Q13445 227 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 CCDC183Q5T5S1 534 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 RMDN2Q96LZ7 410 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 MPHOSPH9Q99550 1183 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 TRIM7Q9C029 511 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 PTGS1P23219 599 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 ACBD5Q5T8D3 534 aaPredicted RBP10.81□□□□□ -0.68
BDNF-201ENST00000314915 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
BDNF-201ENST00000314915 SDCCAG8Q86SQ7 713 aaPredicted RBP10.81□□□□□ -0.68
BDNF-201ENST00000314915 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
BDNF-201ENST00000314915 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
BDNF-201ENST00000314915 NPHP1O15259 732 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 EZH1Q92800 747 aaPredicted RBP10.8□□□□□ -0.68
BDNF-201ENST00000314915 KAT2BQ92831 832 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 CFAP53Q96M91 514 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
BDNF-201ENST00000314915 PYGLP06737 847 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 IPO5O00410 1097 aaKnown RBP10.8□□□□□ -0.68
BDNF-201ENST00000314915 LAMB3Q13751 1172 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.8□□□□□ -0.68
BDNF-201ENST00000314915 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 L2HGDHQ9H9P8 463 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 IQCB1Q15051 598 aa10.8□□□□□ -0.68
BDNF-201ENST00000314915 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 GOLGA6L10A6NI86 522 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 H7C1W4 665 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
BDNF-201ENST00000314915 CCDC15Q0P6D6 951 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 ZKSCAN4Q969J2 545 aaPredicted RBP10.79□□□□□ -0.68
BDNF-201ENST00000314915 ARFGAP3Q9NP61 516 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 GOLGA6L19H0YKK7 550 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 CCDC158Q5M9N0 1113 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 NYAP1Q6ZVC0 841 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 DRC7Q8IY82 874 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 RGL1Q9NZL6 768 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 GPRASP1Q5JY77 1395 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 LIG3P49916 1009 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 SNX1Q13596 522 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 PLEKHO1Q53GL0 409 aaPredicted RBP10.79□□□□□ -0.68
BDNF-201ENST00000314915 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
BDNF-201ENST00000314915 EZRP15311 586 aaKnown RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 FCHSD2O94868 740 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
BDNF-201ENST00000314915 ABCF2Q9UG63 623 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 ERC2O15083 957 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 TBC1D8O95759 1140 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 MICALCLQ6ZW33 695 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 MFN1Q8IWA4 741 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 B4GALNT2Q8NHY0 566 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
BDNF-201ENST00000314915 PYGBP11216 843 aa10.77□□□□□ -0.68
BDNF-201ENST00000314915 NAA25Q14CX7 972 aa10.77□□□□□ -0.68
BDNF-201ENST00000314915 WDR43Q15061 677 aaKnown RBP eCLIP10.77□□□□□ -0.68
BDNF-201ENST00000314915 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.68
BDNF-201ENST00000314915 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.68
BDNF-201ENST00000314915 FAM81AQ8TBF8 368 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms