RNA–Protein interactions for RNA: ENST00000298316.6

ARF6-201, Transcript of ADP ribosylation factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF6, Length 3,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF6-201ENST00000298316 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
ARF6-201ENST00000298316 DDX11Q96FC9 970 aa18.77■□□□□ 0.6
ARF6-201ENST00000298316 KIAA0232Q92628 1395 aa18.77■□□□□ 0.59
ARF6-201ENST00000298316 CPSF1Q10570 1443 aaKnown RBP18.76■□□□□ 0.59
ARF6-201ENST00000298316 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
ARF6-201ENST00000298316 SYAP1Q96A49 352 aaPredicted RBP18.76■□□□□ 0.59
ARF6-201ENST00000298316 BLOC1S2Q6QNY1 142 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 PDRG1Q9NUG6 133 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 CDK12Q9NYV4 1490 aaPredicted RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 TRDNQ13061 729 aa18.75■□□□□ 0.59
ARF6-201ENST00000298316 SKOR2Q2VWA4 1001 aaPredicted RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 EDC3Q96F86 508 aaKnown RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
ARF6-201ENST00000298316 PREX1Q8TCU6 1659 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
ARF6-201ENST00000298316 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 HELBQ8NG08 1087 aaPredicted RBP18.74■□□□□ 0.59
ARF6-201ENST00000298316 ZNF594Q96JF6 807 aaPredicted RBP18.74■□□□□ 0.59
ARF6-201ENST00000298316 PODXL2Q9NZ53 605 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 PTMSP20962 102 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 HSP90AB3PQ58FF7 597 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
ARF6-201ENST00000298316 IQSEC3Q9UPP2 1182 aaPredicted RBP18.74■□□□□ 0.59
ARF6-201ENST00000298316 TIMM10P62072 90 aa18.73■□□□□ 0.59
ARF6-201ENST00000298316 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
ARF6-201ENST00000298316 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
ARF6-201ENST00000298316 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
ARF6-201ENST00000298316 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
ARF6-201ENST00000298316 ABCF2Q9UG63 623 aa18.73■□□□□ 0.59
ARF6-201ENST00000298316 PHKG2P15735 406 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 HAND2P61296 217 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 G3V3G9 751 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 PSMA5P28066 241 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 DCAF8Q5TAQ9 597 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 NECAB1Q8N987 351 aa18.72■□□□□ 0.59
ARF6-201ENST00000298316 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
ARF6-201ENST00000298316 RRAGDQ9NQL2 400 aaPredicted RBP18.71■□□□□ 0.59
ARF6-201ENST00000298316 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
ARF6-201ENST00000298316 ERBB3P21860 1342 aa18.71■□□□□ 0.59
ARF6-201ENST00000298316 ATP2B1P20020 1258 aa18.71■□□□□ 0.59
ARF6-201ENST00000298316 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.71■□□□□ 0.59
ARF6-201ENST00000298316 CHMLP26374 656 aa18.71■□□□□ 0.58
ARF6-201ENST00000298316 TFCP2Q12800 502 aa18.71■□□□□ 0.58
ARF6-201ENST00000298316 LRRFIP1Q32MZ4 808 aaKnown RBP18.71■□□□□ 0.58
ARF6-201ENST00000298316 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.58
ARF6-201ENST00000298316 USP26Q9BXU7 913 aa18.71■□□□□ 0.58
ARF6-201ENST00000298316 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
ARF6-201ENST00000298316 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
ARF6-201ENST00000298316 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
ARF6-201ENST00000298316 HIP1O00291 1037 aa18.69■□□□□ 0.58
ARF6-201ENST00000298316 LARP1BQ659C4 914 aaKnown RBP18.69■□□□□ 0.58
ARF6-201ENST00000298316 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
ARF6-201ENST00000298316 ESPNB1AK53 854 aa18.69■□□□□ 0.58
ARF6-201ENST00000298316 MCM2P49736 904 aa18.69■□□□□ 0.58
ARF6-201ENST00000298316 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
ARF6-201ENST00000298316 PPLO60437 1756 aa18.69■□□□□ 0.58
ARF6-201ENST00000298316 RAD21O60216 631 aa18.68■□□□□ 0.58
ARF6-201ENST00000298316 MRE11P49959 708 aa18.68■□□□□ 0.58
ARF6-201ENST00000298316 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
ARF6-201ENST00000298316 DDB1Q16531 1140 aa18.68■□□□□ 0.58
ARF6-201ENST00000298316 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
ARF6-201ENST00000298316 BEND3Q5T5X7 828 aa18.67■□□□□ 0.58
ARF6-201ENST00000298316 ZC3H13Q5T200 1668 aaKnown RBP18.67■□□□□ 0.58
ARF6-201ENST00000298316 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
ARF6-201ENST00000298316 CHAMP1Q96JM3 812 aa18.67■□□□□ 0.58
ARF6-201ENST00000298316 CD163L1Q9NR16 1453 aa18.67■□□□□ 0.58
ARF6-201ENST00000298316 CD2BP2O95400 341 aaKnown RBP18.66■□□□□ 0.58
ARF6-201ENST00000298316 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
ARF6-201ENST00000298316 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
ARF6-201ENST00000298316 AGLP35573 1532 aa18.66■□□□□ 0.58
ARF6-201ENST00000298316 NMIQ13287 307 aaPredicted RBP18.66■□□□□ 0.58
ARF6-201ENST00000298316 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
ARF6-201ENST00000298316 PHF14O94880 888 aa18.66■□□□□ 0.58
ARF6-201ENST00000298316 CCT2P78371 535 aaKnown RBP18.65■□□□□ 0.58
ARF6-201ENST00000298316 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
ARF6-201ENST00000298316 KCNQ4P56696 695 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 GCKRQ14397 625 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 CCDC129Q6ZRS4 1044 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
ARF6-201ENST00000298316 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 CHAF1AQ13111 956 aaPredicted RBP18.65■□□□□ 0.58
ARF6-201ENST00000298316 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
ARF6-201ENST00000298316 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
ARF6-201ENST00000298316 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
ARF6-201ENST00000298316 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
ARF6-201ENST00000298316 METTL22Q9BUU2 404 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms