RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 CACNA1FO60840 1977 aa28.49■■■□□ 2.15
RETREG2-201ENST00000273048 AMOTL2Q9Y2J4 779 aa28.49■■■□□ 2.15
RETREG2-201ENST00000273048 N4BP2Q86UW6 1770 aaPredicted RBP28.49■■■□□ 2.15
RETREG2-201ENST00000273048 PRIMPOLQ96LW4 560 aa28.48■■■□□ 2.15
RETREG2-201ENST00000273048 MTMR6Q9Y217 621 aa28.48■■■□□ 2.15
RETREG2-201ENST00000273048 ZNF710Q8N1W2 664 aa28.48■■■□□ 2.15
RETREG2-201ENST00000273048 ATP6V1DQ9Y5K8 247 aa28.48■■■□□ 2.15
RETREG2-201ENST00000273048 JAKMIP1Q96N16 626 aaKnown RBP28.47■■■□□ 2.15
RETREG2-201ENST00000273048 PRDM4Q9UKN5 801 aa28.47■■■□□ 2.15
RETREG2-201ENST00000273048 PRPF40BQ6NWY9 871 aaKnown RBP28.46■■■□□ 2.15
RETREG2-201ENST00000273048 USHBP1Q8N6Y0 703 aa28.46■■■□□ 2.15
RETREG2-201ENST00000273048 NLRP6P59044 892 aa28.46■■■□□ 2.15
RETREG2-201ENST00000273048 DIAPH3Q9NSV4 1193 aa28.46■■■□□ 2.15
RETREG2-201ENST00000273048 PDRG1Q9NUG6 133 aa28.46■■■□□ 2.15
RETREG2-201ENST00000273048 SPTLC3Q9NUV7 552 aa28.46■■■□□ 2.15
RETREG2-201ENST00000273048 VPS37CA5D8V6 355 aaPredicted RBP28.45■■■□□ 2.15
RETREG2-201ENST00000273048 PRDM10Q9NQV6 1147 aa28.45■■■□□ 2.15
RETREG2-201ENST00000273048 EID1Q9Y6B2 187 aa28.45■■■□□ 2.15
RETREG2-201ENST00000273048 HOXC9P31274 260 aa28.45■■■□□ 2.14
RETREG2-201ENST00000273048 OS9Q13438 667 aaPredicted RBP28.45■■■□□ 2.14
RETREG2-201ENST00000273048 ST3GAL1Q11201 340 aa28.44■■■□□ 2.14
RETREG2-201ENST00000273048 ANXA1P04083 346 aa28.44■■■□□ 2.14
RETREG2-201ENST00000273048 HMGN5P82970 282 aaKnown RBP28.44■■■□□ 2.14
RETREG2-201ENST00000273048 SPC24Q8NBT2 197 aa28.44■■■□□ 2.14
RETREG2-201ENST00000273048 KCNF1Q9H3M0 494 aa28.44■■■□□ 2.14
RETREG2-201ENST00000273048 PI4KAP2A4QPH2 592 aa28.43■■■□□ 2.14
RETREG2-201ENST00000273048 PI4KAP1Q8N8J0 262 aa28.43■■■□□ 2.14
RETREG2-201ENST00000273048 NECAB1Q8N987 351 aa28.43■■■□□ 2.14
RETREG2-201ENST00000273048 CCDC94Q9BW85 323 aaPredicted RBP28.43■■■□□ 2.14
RETREG2-201ENST00000273048 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
RETREG2-201ENST00000273048 PYCARDQ9ULZ3 195 aa28.43■■■□□ 2.14
RETREG2-201ENST00000273048 RGPD8O14715 1765 aaPredicted RBP28.43■■■□□ 2.14
RETREG2-201ENST00000273048 BEND3Q5T5X7 828 aa28.42■■■□□ 2.14
RETREG2-201ENST00000273048 CHMP3Q9Y3E7 222 aa28.42■■■□□ 2.14
RETREG2-201ENST00000273048 GLRX3O76003 335 aaKnown RBP28.41■■■□□ 2.14
RETREG2-201ENST00000273048 GTF2F1P35269 517 aaKnown RBP eCLIP28.41■■■□□ 2.14
RETREG2-201ENST00000273048 ME3Q16798 604 aa28.41■■■□□ 2.14
RETREG2-201ENST00000273048 VPS53Q5VIR6 699 aa28.41■■■□□ 2.14
RETREG2-201ENST00000273048 DNAAF4Q8WXU2 420 aa28.41■■■□□ 2.14
RETREG2-201ENST00000273048 NWD1Q149M9 1564 aa28.41■■■□□ 2.14
RETREG2-201ENST00000273048 PIK3C2AO00443 1686 aa28.4■■■□□ 2.14
RETREG2-201ENST00000273048 COL9A3Q14050 684 aaPredicted RBP28.4■■■□□ 2.14
RETREG2-201ENST00000273048 CYP46A1Q9Y6A2 500 aa28.4■■■□□ 2.14
RETREG2-201ENST00000273048 ZSWIM6Q9HCJ5 1215 aa28.39■■■□□ 2.14
RETREG2-201ENST00000273048 SMAP1Q8IYB5 467 aaPredicted RBP28.39■■■□□ 2.14
RETREG2-201ENST00000273048 KIAA1524Q8TCG1 905 aa28.39■■■□□ 2.14
RETREG2-201ENST00000273048 BABAM1Q9NWV8 329 aa28.39■■■□□ 2.14
RETREG2-201ENST00000273048 TTC41PQ6P2S7 1318 aa28.39■■■□□ 2.13
RETREG2-201ENST00000273048 FAM173BQ6P4H8 233 aa28.38■■■□□ 2.13
RETREG2-201ENST00000273048 FERMT3Q86UX7 667 aa28.38■■■□□ 2.13
RETREG2-201ENST00000273048 KIF3AQ9Y496 699 aa28.38■■■□□ 2.13
RETREG2-201ENST00000273048 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
RETREG2-201ENST00000273048 RUFY2Q8WXA3 655 aa28.38■■■□□ 2.13
RETREG2-201ENST00000273048 KCNQ3O43525 872 aa28.37■■■□□ 2.13
RETREG2-201ENST00000273048 CRYBG1Q9Y4K1 1723 aa28.37■■■□□ 2.13
RETREG2-201ENST00000273048 HSP90AB4PQ58FF6 505 aa28.37■■■□□ 2.13
RETREG2-201ENST00000273048 SH2B1Q9NRF2 756 aaPredicted RBP28.37■■■□□ 2.13
RETREG2-201ENST00000273048 PA2G4Q9UQ80 394 aaKnown RBP28.37■■■□□ 2.13
RETREG2-201ENST00000273048 CAMK4Q16566 473 aa28.36■■■□□ 2.13
RETREG2-201ENST00000273048 TTC6Q86TZ1 520 aa28.36■■■□□ 2.13
RETREG2-201ENST00000273048 CLASRPQ8N2M8 674 aaKnown RBP28.36■■■□□ 2.13
RETREG2-201ENST00000273048 ZSCAN31Q96LW9 406 aaPredicted RBP28.36■■■□□ 2.13
RETREG2-201ENST00000273048 LGR6Q9HBX8 967 aa28.36■■■□□ 2.13
RETREG2-201ENST00000273048 TPCN1Q9ULQ1 816 aa28.36■■■□□ 2.13
RETREG2-201ENST00000273048 CCDC192P0DO97 292 aa28.36■■■□□ 2.13
RETREG2-201ENST00000273048 EIF4A1P60842 406 aaKnown RBP28.36■■■□□ 2.13
RETREG2-201ENST00000273048 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
RETREG2-201ENST00000273048 BCL2L12Q9HB09 334 aa28.35■■■□□ 2.13
RETREG2-201ENST00000273048 ECHDC1Q9NTX5 307 aa28.35■■■□□ 2.13
RETREG2-201ENST00000273048 NECTIN1Q15223 517 aa28.34■■■□□ 2.13
RETREG2-201ENST00000273048 CDC37L1Q7L3B6 337 aa28.34■■■□□ 2.13
RETREG2-201ENST00000273048 LIG1P18858 919 aa28.34■■■□□ 2.13
RETREG2-201ENST00000273048 LARP1BQ659C4 914 aaKnown RBP28.34■■■□□ 2.13
RETREG2-201ENST00000273048 TM6SF1Q9BZW5 370 aa28.34■■■□□ 2.13
RETREG2-201ENST00000273048 RBM8AQ9Y5S9 174 aaKnown RBP28.33■■■□□ 2.13
RETREG2-201ENST00000273048 CCDC171Q6TFL3 1326 aa28.33■■■□□ 2.13
RETREG2-201ENST00000273048 FAM227BQ96M60 508 aa28.33■■■□□ 2.13
RETREG2-201ENST00000273048 TCEANC2Q96MN5 208 aa28.33■■■□□ 2.13
RETREG2-201ENST00000273048 SLIT1O75093 1534 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 ADCY9O60503 1353 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 TRHP20396 242 aaPredicted RBP28.32■■■□□ 2.12
RETREG2-201ENST00000273048 KCNB2Q92953 911 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 TBX22Q9Y458 520 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 IFIT2P09913 472 aaKnown RBP28.32■■■□□ 2.12
RETREG2-201ENST00000273048 KCNJ4P48050 445 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 CREB3L3Q68CJ9 461 aa28.32■■■□□ 2.12
RETREG2-201ENST00000273048 ARHGAP23Q9P227 1491 aa28.31■■■□□ 2.12
RETREG2-201ENST00000273048 LUZP1Q86V48 1076 aa28.31■■■□□ 2.12
RETREG2-201ENST00000273048 RIOK3O14730 519 aaKnown RBP28.31■■■□□ 2.12
RETREG2-201ENST00000273048 ZKSCAN1P17029 563 aaPredicted RBP28.31■■■□□ 2.12
RETREG2-201ENST00000273048 PTGS1P23219 599 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 KRT85P78386 507 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 CKAP2LQ8IYA6 745 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 MRVI1Q9Y6F6 885 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.3■■■□□ 2.12
RETREG2-201ENST00000273048 CBX1P83916 185 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 PPP4R3BQ5MIZ7 849 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 AACSQ86V21 672 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 FAM200AQ8TCP9 573 aa28.3■■■□□ 2.12
RETREG2-201ENST00000273048 NUP62CLQ9H1M0 184 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms