RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
TMEM258-201ENST00000257262 A0A087WZG4 1122 aa11.12□□□□□ -0.63
TMEM258-201ENST00000257262 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
TMEM258-201ENST00000257262 DIEXFQ68CQ4 756 aaKnown RBP11.12□□□□□ -0.63
TMEM258-201ENST00000257262 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
TMEM258-201ENST00000257262 TM4SF1P30408 202 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 CLCN6P51797 869 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 CALD1Q05682 793 aaKnown RBP11.11□□□□□ -0.63
TMEM258-201ENST00000257262 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
TMEM258-201ENST00000257262 SALL2Q9Y467 1007 aaPredicted RBP11.11□□□□□ -0.63
TMEM258-201ENST00000257262 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
TMEM258-201ENST00000257262 GNAI1P63096 354 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 DZIP3Q86Y13 1208 aaKnown RBP11.1□□□□□ -0.63
TMEM258-201ENST00000257262 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 NLGN2Q8NFZ4 835 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 BCORQ6W2J9 1755 aa11.1□□□□□ -0.63
TMEM258-201ENST00000257262 SCN7AQ01118 1682 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 MYL6BP14649 208 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 DDR1Q08345 913 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
TMEM258-201ENST00000257262 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
TMEM258-201ENST00000257262 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
TMEM258-201ENST00000257262 GABBR2O75899 941 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 NFIXQ14938 502 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 PDIA6Q15084 440 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 BICDL1Q6ZP65 573 aa11.08□□□□□ -0.64
TMEM258-201ENST00000257262 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
TMEM258-201ENST00000257262 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
TMEM258-201ENST00000257262 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
TMEM258-201ENST00000257262 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
TMEM258-201ENST00000257262 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
TMEM258-201ENST00000257262 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
TMEM258-201ENST00000257262 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
TMEM258-201ENST00000257262 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 ANXA1P04083 346 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 SERPINB2P05120 415 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
TMEM258-201ENST00000257262 NUP98P52948 1817 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
TMEM258-201ENST00000257262 HOXB7P09629 217 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 HLFQ16534 295 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 CLEC4GQ6UXB4 293 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 TTLL7Q6ZT98 887 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 C10orf71Q711Q0 1435 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
TMEM258-201ENST00000257262 IL16Q14005 1332 aa11.05□□□□□ -0.64
TMEM258-201ENST00000257262 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 TGFB2P61812 414 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 GPR162Q16538 588 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM258-201ENST00000257262 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 ZNF652Q9Y2D9 606 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 MAP3K15Q6ZN16 1313 aa11.04□□□□□ -0.64
TMEM258-201ENST00000257262 ERVV-1B6SEH8 477 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
TMEM258-201ENST00000257262 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 TSPYL6Q8N831 410 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
TMEM258-201ENST00000257262 WWC3Q9ULE0 1092 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 CARMIL3Q8ND23 1372 aa11.03□□□□□ -0.64
TMEM258-201ENST00000257262 RGL2O15211 777 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 DPEP1P16444 411 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 KCNA3P22001 575 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 PRR5LQ6MZQ0 368 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
TMEM258-201ENST00000257262 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
TMEM258-201ENST00000257262 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
TMEM258-201ENST00000257262 YBX3P16989 372 aaKnown RBP eCLIP11.01□□□□□ -0.656e-35■□□□□ 10.3
TMEM258-201ENST00000257262 CHRNA5P30532 468 aa11.01□□□□□ -0.65
TMEM258-201ENST00000257262 TWISTNBQ3B726 338 aaPredicted RBP11.01□□□□□ -0.65
TMEM258-201ENST00000257262 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
TMEM258-201ENST00000257262 BRCA1P38398 1863 aaKnown RBP11.01□□□□□ -0.65
TMEM258-201ENST00000257262 ANKRD31Q8N7Z5 1873 aa11.01□□□□□ -0.65
TMEM258-201ENST00000257262 ZNF521Q96K83 1311 aa11.01□□□□□ -0.65
TMEM258-201ENST00000257262 FANCIQ9NVI1 1328 aa11.01□□□□□ -0.65
TMEM258-201ENST00000257262 EXOSC9Q06265 439 aaKnown RBP11□□□□□ -0.65
TMEM258-201ENST00000257262 GOLGA2Q08379 1002 aa11□□□□□ -0.65
TMEM258-201ENST00000257262 CCDC30Q5VVM6 783 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms