RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 TSG101Q99816 390 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
DSG3-201ENST00000257189 KIF4AO95239 1232 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
DSG3-201ENST00000257189 CCDC30Q5VVM6 783 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
DSG3-201ENST00000257189 BCCIPQ9P287 314 aaKnown RBP eCLIP9.47□□□□□ -0.89
DSG3-201ENST00000257189 GNAI2P04899 355 aa9.46□□□□□ -0.89
DSG3-201ENST00000257189 PANK1Q8TE04 598 aa9.46□□□□□ -0.89
DSG3-201ENST00000257189 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.89
DSG3-201ENST00000257189 AIMP1Q12904 312 aaKnown RBP9.46□□□□□ -0.89
DSG3-201ENST00000257189 SAMD1Q6SPF0 538 aaPredicted RBP9.46□□□□□ -0.89
DSG3-201ENST00000257189 CDK19Q9BWU1 502 aa9.46□□□□□ -0.89
DSG3-201ENST00000257189 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.89
DSG3-201ENST00000257189 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.89
DSG3-201ENST00000257189 TACC1O75410 805 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 ANAPC15P60006 121 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 SOGA3Q5TF21 947 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 TSPYL4Q9UJ04 414 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 LUC7L2Q9Y383 392 aaKnown RBP9.46□□□□□ -0.9
DSG3-201ENST00000257189 NEBLO76041 1014 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 RNF168Q8IYW5 571 aaPredicted RBP9.46□□□□□ -0.9
DSG3-201ENST00000257189 OGFRQ9NZT2 677 aa9.46□□□□□ -0.9
DSG3-201ENST00000257189 NBPF11Q86T75 865 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 POTEDQ86YR6 584 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 PPFIBP2Q8ND30 876 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 CCDC110Q8TBZ0 833 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
DSG3-201ENST00000257189 SPON1Q9HCB6 807 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 OTUD6BQ8N6M0 293 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 NEUROD6Q96NK8 337 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 STIM2Q9P246 746 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 LMNTD2Q8IXW0 634 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 RPRD2Q5VT52 1461 aaKnown RBP9.45□□□□□ -0.9
DSG3-201ENST00000257189 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
DSG3-201ENST00000257189 STX1AQ16623 288 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 GRIPAP1Q4V328 841 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
DSG3-201ENST00000257189 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
DSG3-201ENST00000257189 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 SURF6O75683 361 aaKnown RBP9.44□□□□□ -0.9
DSG3-201ENST00000257189 CCDC178Q5BJE1 867 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 SMC6Q96SB8 1091 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 ATP10AO60312 1499 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 UBE4AQ14139 1066 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 LARP1Q6PKG0 1096 aaKnown RBP9.44□□□□□ -0.9
DSG3-201ENST00000257189 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 MICALL1Q8N3F8 863 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 CTCFLQ8NI51 663 aaPredicted RBP9.44□□□□□ -0.9
DSG3-201ENST00000257189 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 B4GALNT4Q76KP1 1039 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 CCDC77Q9BR77 488 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 RSPH14Q9UHP6 348 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
DSG3-201ENST00000257189 CCDC158Q5M9N0 1113 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
DSG3-201ENST00000257189 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 MYO1BO43795 1136 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 LACTBP83111 547 aaPredicted RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 CEBPZQ03701 1054 aaKnown RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 GABPB1Q06547 395 aaPredicted RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 HLTFQ14527 1009 aaKnown RBP eCLIP9.43□□□□□ -0.9
DSG3-201ENST00000257189 SH2D4BQ5SQS7 431 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 CACNA2D4Q7Z3S7 1137 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 FMNL3Q8IVF7 1028 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.43□□□□□ -0.9
DSG3-201ENST00000257189 TSNARE1Q96NA8 513 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 HOMER2Q9NSB8 354 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 GNL3LQ9NVN8 582 aaKnown RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 CTAGE15A4D2H0 777 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 MAP4K4O95819 1239 aaPredicted RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 CTAGE8P0CG41 777 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 TERF1P54274 439 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 CTAGE6Q86UF2 777 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 CTAGE4Q8IX94 777 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 C16orf45Q96MC5 204 aaPredicted RBP9.43□□□□□ -0.9
DSG3-201ENST00000257189 HDAC9Q9UKV0 1011 aa9.43□□□□□ -0.9
DSG3-201ENST00000257189 PRPHP41219 470 aa9.42□□□□□ -0.9
DSG3-201ENST00000257189 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
DSG3-201ENST00000257189 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms