RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 HCLS1P14317 486 aaPredicted RBP22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 NEK1Q96PY6 1258 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 EYA1Q99502 592 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 CAVIN2O95810 425 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 CBX1P83916 185 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 USP48Q86UV5 1035 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 C8orf76Q96K31 380 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 CEP89Q96ST8 783 aa22.52■■□□□ 1.2
PPFIA1-201ENST00000253925 METTL24Q5JXM2 366 aa22.52■■□□□ 1.19
PPFIA1-201ENST00000253925 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 HS1BP3Q53T59 392 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 PRIM1P49642 420 aaKnown RBP22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 PLA2R1Q13018 1463 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 STARD3NLO95772 234 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 PDCL2Q8N4E4 241 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 CCDC85AQ96PX6 553 aaPredicted RBP22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 KSR2Q6VAB6 950 aa22.51■■□□□ 1.19
PPFIA1-201ENST00000253925 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 TDO2P48775 406 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 PPFIBP1Q86W92 1011 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 IFNL2Q8IZJ0 200 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 ANKRD24Q8TF21 1146 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 AIDAQ96BJ3 306 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 AKAP4Q5JQC9 854 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 NUP133Q8WUM0 1156 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 MYOM2P54296 1465 aa22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 RBM8AQ9Y5S9 174 aaKnown RBP22.5■■□□□ 1.19
PPFIA1-201ENST00000253925 NCKAP5LQ9HCH0 1330 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 UBE3BQ7Z3V4 1068 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 UBAC1Q9BSL1 405 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 CLIP2Q9UDT6 1046 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 NOL7Q9UMY1 257 aaKnown RBP22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 MAP3K5Q99683 1374 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 GRM8O00222 908 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 CNPY2Q9Y2B0 182 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
PPFIA1-201ENST00000253925 SFPQP23246 707 aaKnown RBP eCLIP22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 F13A1P00488 732 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 PTPN14Q15678 1187 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 RAD21O60216 631 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 ZNF165P49910 485 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 BRPF1P55201 1214 aaPredicted RBP22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 ZSCAN16Q9H4T2 348 aaPredicted RBP22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 NEMFO60524 1076 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 ZKSCAN5Q9Y2L8 839 aa22.48■■□□□ 1.19
PPFIA1-201ENST00000253925 TRIM34Q9BYJ4 488 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 GIMAP6Q6P9H5 292 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 ERCC4Q92889 916 aaPredicted RBP22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 SNRPA1P09661 255 aaKnown RBP22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 NECAB1Q8N987 351 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 G2E3Q7L622 706 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 LINS1Q8NG48 757 aa22.47■■□□□ 1.19
PPFIA1-201ENST00000253925 IFIT5Q13325 482 aaKnown RBP22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 GUCY1B3Q02153 619 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 TAF3Q5VWG9 929 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 KRT28Q7Z3Y7 464 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 MAGEC2Q9UBF1 373 aaPredicted RBP22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 GOLIM4O00461 696 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 CFAP100Q494V2 611 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 FSIP1Q8NA03 581 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 BABAM1Q9NWV8 329 aa22.46■■□□□ 1.19
PPFIA1-201ENST00000253925 ZNF213O14771 459 aa22.45■■□□□ 1.19
PPFIA1-201ENST00000253925 TTLL5Q6EMB2 1281 aa22.45■■□□□ 1.19
PPFIA1-201ENST00000253925 ABCC4O15439 1325 aa22.45■■□□□ 1.18
PPFIA1-201ENST00000253925 CCT2P78371 535 aaKnown RBP22.45■■□□□ 1.18
PPFIA1-201ENST00000253925 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
PPFIA1-201ENST00000253925 DYNC1I1O14576 645 aa22.45■■□□□ 1.18
PPFIA1-201ENST00000253925 PRIMPOLQ96LW4 560 aa22.45■■□□□ 1.18
PPFIA1-201ENST00000253925 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 ERICH4A6NGS2 130 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 STX1AQ16623 288 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 STK11IPQ8N1F8 1099 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 AK2P54819 239 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 LRP2BPQ9P2M1 347 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 CEP131Q9UPN4 1083 aa22.44■■□□□ 1.18
PPFIA1-201ENST00000253925 KIF18AQ8NI77 898 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 NAP1L1P55209 391 aaKnown RBP22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 AK7Q96M32 723 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 RUFY1Q96T51 708 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 GOLGA8BA8MQT2 603 aa22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 PATL2C9JE40 543 aaKnown RBP22.43■■□□□ 1.18
PPFIA1-201ENST00000253925 CAGE1Q8TC20 777 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 FAM200AQ8TCP9 573 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 STIM1Q13586 685 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 BRF1Q92994 677 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 KIAA0232Q92628 1395 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 TNNT1P13805 278 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 XAGE3Q8WTP9 111 aa22.42■■□□□ 1.18
PPFIA1-201ENST00000253925 CCDC196A0A1B0GTZ2 297 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 NAPBQ9H115 298 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 IGHMBP2P38935 993 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms