RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CHMP4AQ9BY43 222 aa31.57■■■□□ 2.64
SDF2L1-201ENST00000248958 GRIN3BO60391 1043 aa31.56■■■□□ 2.64
SDF2L1-201ENST00000248958 HDGFL1Q5TGJ6 251 aa31.56■■■□□ 2.64
SDF2L1-201ENST00000248958 DDX21Q9NR30 783 aaKnown RBP eCLIP31.56■■■□□ 2.64
SDF2L1-201ENST00000248958 NUP98P52948 1817 aa31.56■■■□□ 2.64
SDF2L1-201ENST00000248958 DIEXFQ68CQ4 756 aaKnown RBP31.54■■■□□ 2.64
SDF2L1-201ENST00000248958 LRP10Q7Z4F1 713 aa31.54■■■□□ 2.64
SDF2L1-201ENST00000248958 SENP3-EIF4A1A0A087X0R7 540 aa31.53■■■□□ 2.64
SDF2L1-201ENST00000248958 TTLL7Q6ZT98 887 aa31.53■■■□□ 2.64
SDF2L1-201ENST00000248958 NECTIN2Q92692 538 aa31.53■■■□□ 2.64
SDF2L1-201ENST00000248958 DBF4Q9UBU7 674 aaPredicted RBP31.53■■■□□ 2.64
SDF2L1-201ENST00000248958 CHD4Q14839 1912 aa31.53■■■□□ 2.64
SDF2L1-201ENST00000248958 DPEP1P16444 411 aa31.52■■■□□ 2.64
SDF2L1-201ENST00000248958 SALL2Q9Y467 1007 aaPredicted RBP31.52■■■□□ 2.64
SDF2L1-201ENST00000248958 BRCA1P38398 1863 aaKnown RBP31.52■■■□□ 2.64
SDF2L1-201ENST00000248958 A0A0G2JLW4 131 aa31.51■■■□□ 2.63
SDF2L1-201ENST00000248958 YBX3P16989 372 aaKnown RBP eCLIP31.51■■■□□ 2.639e-19■■□□□ 13.3
SDF2L1-201ENST00000248958 HLFQ16534 295 aa31.51■■■□□ 2.63
SDF2L1-201ENST00000248958 PDZRN3Q9UPQ7 1066 aa31.51■■■□□ 2.63
SDF2L1-201ENST00000248958 NIP7Q9Y221 180 aaKnown RBP eCLIP31.51■■■□□ 2.63
SDF2L1-201ENST00000248958 PROSER3Q2NL68 480 aa31.5■■■□□ 2.63
SDF2L1-201ENST00000248958 ATP10DQ9P241 1426 aa31.49■■■□□ 2.63
SDF2L1-201ENST00000248958 NPHP1O15259 732 aa31.49■■■□□ 2.63
SDF2L1-201ENST00000248958 PRR5LQ6MZQ0 368 aa31.49■■■□□ 2.63
SDF2L1-201ENST00000248958 CNBD1Q8NA66 436 aa31.49■■■□□ 2.63
SDF2L1-201ENST00000248958 CHPF2Q9P2E5 772 aa31.49■■■□□ 2.63
SDF2L1-201ENST00000248958 ANXA1P04083 346 aa31.48■■■□□ 2.63
SDF2L1-201ENST00000248958 ST5P78524 1137 aa31.48■■■□□ 2.63
SDF2L1-201ENST00000248958 GIGYF2Q6Y7W6 1299 aaKnown RBP31.48■■■□□ 2.63
SDF2L1-201ENST00000248958 ZBTB3Q9H5J0 574 aa31.48■■■□□ 2.63
SDF2L1-201ENST00000248958 PIM2Q9P1W9 311 aa31.48■■■□□ 2.63
SDF2L1-201ENST00000248958 TPTE2Q6XPS3 522 aa31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 COPS6Q7L5N1 327 aa31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 NBPF5PQ86XG9 351 aaPredicted RBP31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 C8orf58Q8NAV2 365 aa31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 TSR2Q969E8 191 aaKnown RBP31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 BRIP1Q9BX63 1249 aa31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 HYPKQ9NX55 129 aa31.47■■■□□ 2.63
SDF2L1-201ENST00000248958 UTRNP46939 3433 aa31.46■■■□□ 2.63
SDF2L1-201ENST00000248958 DLEC1Q9Y238 1755 aa31.46■■■□□ 2.63
SDF2L1-201ENST00000248958 KCNA3P22001 575 aa31.46■■■□□ 2.63
SDF2L1-201ENST00000248958 PDE6BP35913 854 aa31.46■■■□□ 2.63
SDF2L1-201ENST00000248958 ELL2O00472 640 aaPredicted RBP31.45■■■□□ 2.63
SDF2L1-201ENST00000248958 ANKRD31Q8N7Z5 1873 aa31.45■■■□□ 2.63
SDF2L1-201ENST00000248958 XAGE3Q8WTP9 111 aa31.45■■■□□ 2.63
SDF2L1-201ENST00000248958 AIMP1Q12904 312 aaKnown RBP31.44■■■□□ 2.62
SDF2L1-201ENST00000248958 HSP90AB3PQ58FF7 597 aa31.44■■■□□ 2.62
SDF2L1-201ENST00000248958 ARFGEF1Q9Y6D6 1849 aa31.43■■■□□ 2.62
SDF2L1-201ENST00000248958 CHRNA5P30532 468 aa31.43■■■□□ 2.62
SDF2L1-201ENST00000248958 CCDC30Q5VVM6 783 aa31.43■■■□□ 2.62
SDF2L1-201ENST00000248958 NYXQ9GZU5 481 aa31.43■■■□□ 2.62
SDF2L1-201ENST00000248958 BCS1LQ9Y276 419 aa31.43■■■□□ 2.62
SDF2L1-201ENST00000248958 H0YIN7 160 aa31.42■■■□□ 2.62
SDF2L1-201ENST00000248958 ANKRD36CQ5JPF3 1778 aa31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 C2CD5Q86YS7 1000 aa31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 ZNF34Q8IZ26 560 aa31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 WWC3Q9ULE0 1092 aa31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 FANCIQ9NVI1 1328 aa31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 IBTKQ9P2D0 1353 aaPredicted RBP31.41■■■□□ 2.62
SDF2L1-201ENST00000248958 GOLGA2Q08379 1002 aa31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 TWISTNBQ3B726 338 aaPredicted RBP31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 PARP10Q53GL7 1025 aa31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 DALRD3Q5D0E6 543 aaKnown RBP31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 TSPYL6Q8N831 410 aa31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 MYH16Q9H6N6 1097 aa31.4■■■□□ 2.62
SDF2L1-201ENST00000248958 GTF2E1P29083 439 aaPredicted RBP31.39■■■□□ 2.62
SDF2L1-201ENST00000248958 PLBD2Q8NHP8 589 aa31.39■■■□□ 2.62
SDF2L1-201ENST00000248958 ANKRD13DQ6ZTN6 518 aa31.37■■■□□ 2.61
SDF2L1-201ENST00000248958 PPP1R42Q7Z4L9 355 aa31.37■■■□□ 2.61
SDF2L1-201ENST00000248958 ZNF521Q96K83 1311 aa31.37■■■□□ 2.61
SDF2L1-201ENST00000248958 FAM177BA6PVY3 158 aa31.36■■■□□ 2.61
SDF2L1-201ENST00000248958 GPTP24298 496 aa31.36■■■□□ 2.61
SDF2L1-201ENST00000248958 CCDC24Q8N4L8 307 aa31.36■■■□□ 2.61
SDF2L1-201ENST00000248958 UBN2Q6ZU65 1347 aa31.35■■■□□ 2.61
SDF2L1-201ENST00000248958 TCIRG1Q13488 830 aa31.35■■■□□ 2.61
SDF2L1-201ENST00000248958 STK31Q9BXU1 1019 aa31.35■■■□□ 2.61
SDF2L1-201ENST00000248958 CACNA1FO60840 1977 aa31.34■■■□□ 2.61
SDF2L1-201ENST00000248958 MIER1Q8N108 512 aa31.34■■■□□ 2.61
SDF2L1-201ENST00000248958 TTLL6Q8N841 843 aa31.34■■■□□ 2.61
SDF2L1-201ENST00000248958 COL11A2P13942 1736 aaPredicted RBP31.33■■■□□ 2.61
SDF2L1-201ENST00000248958 SUSD4Q5VX71 490 aa31.33■■■□□ 2.61
SDF2L1-201ENST00000248958 RNF123Q5XPI4 1314 aa31.32■■■□□ 2.6
SDF2L1-201ENST00000248958 ARFGEF2Q9Y6D5 1785 aa31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 KLRG2A4D1S0 409 aaPredicted RBP31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 STYK1Q6J9G0 422 aa31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 ZNF622Q969S3 477 aaKnown RBP eCLIP31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 MASTLQ96GX5 879 aa31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 PHAXQ9H814 394 aaKnown RBP31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 SPINK5Q9NQ38 1064 aaPredicted RBP31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 RIC1Q4ADV7 1423 aa31.31■■■□□ 2.6
SDF2L1-201ENST00000248958 NTSR2O95665 410 aa31.3■■■□□ 2.6
SDF2L1-201ENST00000248958 DDX58O95786 925 aaKnown RBP31.3■■■□□ 2.6
SDF2L1-201ENST00000248958 SRGNP10124 158 aa31.3■■■□□ 2.6
SDF2L1-201ENST00000248958 EXOSC9Q06265 439 aaKnown RBP31.3■■■□□ 2.6
SDF2L1-201ENST00000248958 UTP14AQ9BVJ6 771 aaKnown RBP31.3■■■□□ 2.6
SDF2L1-201ENST00000248958 RIC3Q7Z5B4 369 aa31.29■■■□□ 2.6
SDF2L1-201ENST00000248958 CNKSR1Q969H4 720 aa31.29■■■□□ 2.6
SDF2L1-201ENST00000248958 VAMP4O75379 141 aa31.28■■■□□ 2.6
SDF2L1-201ENST00000248958 NLRP10Q86W26 655 aa31.28■■■□□ 2.6
SDF2L1-201ENST00000248958 NUTM1Q86Y26 1132 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms