RNA–Protein interactions for RNA: ENST00000244458.6

PACSIN1-201, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-201ENST00000244458 KIAA2012Q0VF49 1180 aa14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 A1BGP04217 495 aa14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 TMOD3Q9NYL9 352 aa14.11□□□□□ -0.15
PACSIN1-201ENST00000244458 IQSEC2Q5JU85 1478 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 CAMK4Q16566 473 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 TTC39AQ5SRH9 613 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 FAM227BQ96M60 508 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 CD163L1Q9NR16 1453 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 HAND2P61296 217 aa14.1□□□□□ -0.15
PACSIN1-201ENST00000244458 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 ISY1Q9ULR0 285 aaKnown RBP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 LIMCH1Q9UPQ0 1083 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 TIMM10P62072 90 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 CCT2P78371 535 aaKnown RBP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 DDX21Q9NR30 783 aaKnown RBP eCLIP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 RBM8AQ9Y5S9 174 aaKnown RBP14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 MYO3AQ8NEV4 1616 aa14.09□□□□□ -0.15
PACSIN1-201ENST00000244458 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.15
PACSIN1-201ENST00000244458 IDH1O75874 414 aaKnown RBP14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 ATP2B1P20020 1258 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 AK2P54819 239 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 TFCP2Q12800 502 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 CCDC129Q6ZRS4 1044 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 ZNF594Q96JF6 807 aaPredicted RBP14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 MBD3O95983 291 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 CHST3Q7LGC8 479 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 EVI5LQ96CN4 794 aa14.08□□□□□ -0.16
PACSIN1-201ENST00000244458 GJB2P29033 226 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 BEND3Q5T5X7 828 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 ARHGEF25Q86VW2 580 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 NPHP3Q7Z494 1330 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 ESPNB1AK53 854 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 IFIT1P09914 478 aaKnown RBP14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 HIP1O00291 1037 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 FAM173BQ6P4H8 233 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 CNPY2Q9Y2B0 182 aa14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
PACSIN1-201ENST00000244458 TRDNQ13061 729 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 ZSCAN23Q3MJ62 389 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 METTL24Q5JXM2 366 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 ALDH1L1O75891 902 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 MYOM1P52179 1685 aa14.06□□□□□ -0.16
PACSIN1-201ENST00000244458 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 ADAMTS13Q76LX8 1427 aa14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 ZC3H13Q5T200 1668 aaKnown RBP14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 EAF2Q96CJ1 260 aaPredicted RBP14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 DBNDD2Q9BQY9 259 aa14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 TLR7Q9NYK1 1049 aaKnown RBP14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 PTCH1Q13635 1447 aa14.05□□□□□ -0.16
PACSIN1-201ENST00000244458 STX6O43752 255 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 KLHL40Q2TBA0 621 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 SLC52A2Q9HAB3 445 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 CWC25Q9NXE8 425 aaPredicted RBP14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 HELBQ8NG08 1087 aaPredicted RBP14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 PPLO60437 1756 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 PTH1RQ03431 593 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 GAS2L3Q86XJ1 694 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
PACSIN1-201ENST00000244458 BECN2A8MW95 431 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 CKAP2LQ8IYA6 745 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 IQSEC3Q9UPP2 1182 aaPredicted RBP14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 TTLL7Q6ZT98 887 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 BRF1Q92994 677 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 SNX14Q9Y5W7 946 aa14.03□□□□□ -0.16
PACSIN1-201ENST00000244458 SGSM2O43147 1006 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms