RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
PCDHB5-201ENST00000231134 GEMIN8Q9NWZ8 242 aaKnown RBP16.06■□□□□ 0.16
PCDHB5-201ENST00000231134 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
PCDHB5-201ENST00000231134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.06■□□□□ 0.16
PCDHB5-201ENST00000231134 MYOM1P52179 1685 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 MCM10Q7L590 875 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 FAM53CQ9NYF3 392 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 ERBB3P21860 1342 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 MSH6P52701 1360 aa16.05■□□□□ 0.16
PCDHB5-201ENST00000231134 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 SRLQ86TD4 932 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 MED14O60244 1454 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 C11orf57Q6ZUT1 292 aaPredicted RBP16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 BANK1Q8NDB2 785 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 SHPRHQ149N8 1683 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 NRDCO43847 1150 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 FAM193AP78312 1265 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
PCDHB5-201ENST00000231134 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 CHRM1P11229 460 aaPredicted RBP16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 MCM6Q14566 821 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 TMC6Q7Z403 805 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 VPS18Q9P253 973 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 NEMFO60524 1076 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 FCHSD2O94868 740 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 EVCP57679 992 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
PCDHB5-201ENST00000231134 PHACTR2O75167 634 aa16.02■□□□□ 0.16
PCDHB5-201ENST00000231134 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
PCDHB5-201ENST00000231134 CABP1Q9NZU7 370 aa16.02■□□□□ 0.16
PCDHB5-201ENST00000231134 MADDQ8WXG6 1647 aa16.02■□□□□ 0.16
PCDHB5-201ENST00000231134 CCZ1BP86790 482 aa16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 DDX11Q96FC9 970 aa16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 NCAPGQ9BPX3 1015 aa16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.15
PCDHB5-201ENST00000231134 HSPA4P34932 840 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 AOPEPQ8N6M6 819 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 YY1AP1Q9H869 796 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 KIF2AO00139 706 aaPredicted RBP16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 ADAM21Q9UKJ8 722 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
PCDHB5-201ENST00000231134 PTCH1Q13635 1447 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 SASH3O75995 380 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
PCDHB5-201ENST00000231134 PACS2Q86VP3 889 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 FBXO18Q8NFZ0 1043 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 CLSTN2Q9H4D0 955 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 A0A1W2PP64 1363 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 BRD2P25440 801 aaKnown RBP16■□□□□ 0.15
PCDHB5-201ENST00000231134 FOXR1Q6PIV2 292 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 GOLGA5Q8TBA6 731 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
PCDHB5-201ENST00000231134 ARFGAP3Q9NP61 516 aa16■□□□□ 0.15
PCDHB5-201ENST00000231134 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 ATP10AO60312 1499 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 CEP152O94986 1710 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 G2E3Q7L622 706 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 CLGNO14967 610 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
PCDHB5-201ENST00000231134 IQGAP1P46940 1657 aa15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 RNF17Q9BXT8 1623 aaKnown RBP15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 E4F1Q66K89 784 aaPredicted RBP15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 SCAND2PQ9GZW5 306 aaPredicted RBP15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 CYP46A1Q9Y6A2 500 aa15.98■□□□□ 0.15
PCDHB5-201ENST00000231134 ME3Q16798 604 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 H3BQV1 296 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 ACTN2P35609 894 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 PRAM1Q96QH2 718 aa15.97■□□□□ 0.15
PCDHB5-201ENST00000231134 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms